GCA_958405325.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCKGJPLGO_1 (original name was: gnl|Prokka|CKGJPLGO_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RRE-containing	441,514	461,780

gnlProkkaCKGJPLGO_3 (original name was: gnl|Prokka|CKGJPLGO_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RRE-containing	1	16,443

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	RRE-containing	441,514	461,780
Region 3.1	RRE-containing	1	16,443

No secondary metabolite regions were found in these records:: gnlProkkaCKGJPLGO_2 (original name was: gnl|Prokka|CKGJPLGO_2); gnlProkkaCKGJPLGO_4 (original name was: gnl|Prokka|CKGJPLGO_4); gnlProkkaCKGJPLGO_5 (original name was: gnl|Prokka|CKGJPLGO_5); gnlProkkaCKGJPLGO_6 (original name was: gnl|Prokka|CKGJPLGO_6); gnlProkkaCKGJPLGO_7 (original name was: gnl|Prokka|CKGJPLGO_7); gnlProkkaCKGJPLGO_8 (original name was: gnl|Prokka|CKGJPLGO_8); gnlProkkaCKGJPLGO_9 (original name was: gnl|Prokka|CKGJPLGO_9); gnlProkkaCKGJPLGO_10 (original name was: gnl|Prokka|CKGJPLGO_10); gnlProkkaCKGJPLGO_11 (original name was: gnl|Prokka|CKGJPLGO_11); gnlProkkaCKGJPLGO_12 (original name was: gnl|Prokka|CKGJPLGO_12); gnlProkkaCKGJPLGO_13 (original name was: gnl|Prokka|CKGJPLGO_13); gnlProkkaCKGJPLGO_14 (original name was: gnl|Prokka|CKGJPLGO_14); gnlProkkaCKGJPLGO_15 (original name was: gnl|Prokka|CKGJPLGO_15); gnlProkkaCKGJPLGO_16 (original name was: gnl|Prokka|CKGJPLGO_16); gnlProkkaCKGJPLGO_17 (original name was: gnl|Prokka|CKGJPLGO_17); gnlProkkaCKGJPLGO_18 (original name was: gnl|Prokka|CKGJPLGO_18); gnlProkkaCKGJPLGO_19 (original name was: gnl|Prokka|CKGJPLGO_19); gnlProkkaCKGJPLGO_20 (original name was: gnl|Prokka|CKGJPLGO_20); gnlProkkaCKGJPLGO_21 (original name was: gnl|Prokka|CKGJPLGO_21); gnlProkkaCKGJPLGO_22 (original name was: gnl|Prokka|CKGJPLGO_22); gnlProkkaCKGJPLGO_23 (original name was: gnl|Prokka|CKGJPLGO_23); gnlProkkaCKGJPLGO_24 (original name was: gnl|Prokka|CKGJPLGO_24); gnlProkkaCKGJPLGO_25 (original name was: gnl|Prokka|CKGJPLGO_25); gnlProkkaCKGJPLGO_26 (original name was: gnl|Prokka|CKGJPLGO_26); gnlProkkaCKGJPLGO_27 (original name was: gnl|Prokka|CKGJPLGO_27); gnlProkkaCKGJPLGO_28 (original name was: gnl|Prokka|CKGJPLGO_28); gnlProkkaCKGJPLGO_29 (original name was: gnl|Prokka|CKGJPLGO_29); gnlProkkaCKGJPLGO_30 (original name was: gnl|Prokka|CKGJPLGO_30); gnlProkkaCKGJPLGO_31 (original name was: gnl|Prokka|CKGJPLGO_31); gnlProkkaCKGJPLGO_32 (original name was: gnl|Prokka|CKGJPLGO_32); gnlProkkaCKGJPLGO_33 (original name was: gnl|Prokka|CKGJPLGO_33); gnlProkkaCKGJPLGO_34 (original name was: gnl|Prokka|CKGJPLGO_34); gnlProkkaCKGJPLGO_35 (original name was: gnl|Prokka|CKGJPLGO_35); gnlProkkaCKGJPLGO_36 (original name was: gnl|Prokka|CKGJPLGO_36); gnlProkkaCKGJPLGO_37 (original name was: gnl|Prokka|CKGJPLGO_37); gnlProkkaCKGJPLGO_38 (original name was: gnl|Prokka|CKGJPLGO_38); gnlProkkaCKGJPLGO_39 (original name was: gnl|Prokka|CKGJPLGO_39); gnlProkkaCKGJPLGO_40 (original name was: gnl|Prokka|CKGJPLGO_40); gnlProkkaCKGJPLGO_41 (original name was: gnl|Prokka|CKGJPLGO_41); gnlProkkaCKGJPLGO_42 (original name was: gnl|Prokka|CKGJPLGO_42); gnlProkkaCKGJPLGO_43 (original name was: gnl|Prokka|CKGJPLGO_43); gnlProkkaCKGJPLGO_44 (original name was: gnl|Prokka|CKGJPLGO_44); gnlProkkaCKGJPLGO_45 (original name was: gnl|Prokka|CKGJPLGO_45); gnlProkkaCKGJPLGO_46 (original name was: gnl|Prokka|CKGJPLGO_46); gnlProkkaCKGJPLGO_47 (original name was: gnl|Prokka|CKGJPLGO_47)

Compact view

gnlProkkaCKGJPLGO_1 - Region 1 - RRE-containing

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Location: 441,514 - 461,780 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCKGJPLGO_3 - Region 1 - RRE-containing

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Location: 1 - 16,443 nt. (total: 16,443 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.