GCA_958414985.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMKIECKOO_1 (original name was: gnl|Prokka|MKIECKOO_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	lanthipeptide-class-ii	1	12,669

gnlProkkaMKIECKOO_14 (original name was: gnl|Prokka|MKIECKOO_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	NRPS	1,615	50,599	dipeptide aldehydes	NRP	94%

gnlProkkaMKIECKOO_18 (original name was: gnl|Prokka|MKIECKOO_18)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	ranthipeptide	28,477	50,065

gnlProkkaMKIECKOO_62 (original name was: gnl|Prokka|MKIECKOO_62)

Region	Type	From	To	Most similar known cluster		Similarity
Region 62.1	cyclic-lactone-autoinducer	1	19,737

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	lanthipeptide-class-ii	1	12,669
Region 14.1	NRPS	1,615	50,599	dipeptide aldehydes	NRP	94%
Region 18.1	ranthipeptide	28,477	50,065
Region 62.1	cyclic-lactone-autoinducer	1	19,737

No secondary metabolite regions were found in these records:: gnlProkkaMKIECKOO_2 (original name was: gnl|Prokka|MKIECKOO_2); gnlProkkaMKIECKOO_3 (original name was: gnl|Prokka|MKIECKOO_3); gnlProkkaMKIECKOO_4 (original name was: gnl|Prokka|MKIECKOO_4); gnlProkkaMKIECKOO_5 (original name was: gnl|Prokka|MKIECKOO_5); gnlProkkaMKIECKOO_6 (original name was: gnl|Prokka|MKIECKOO_6); gnlProkkaMKIECKOO_7 (original name was: gnl|Prokka|MKIECKOO_7); gnlProkkaMKIECKOO_8 (original name was: gnl|Prokka|MKIECKOO_8); gnlProkkaMKIECKOO_9 (original name was: gnl|Prokka|MKIECKOO_9); gnlProkkaMKIECKOO_10 (original name was: gnl|Prokka|MKIECKOO_10); gnlProkkaMKIECKOO_11 (original name was: gnl|Prokka|MKIECKOO_11); gnlProkkaMKIECKOO_12 (original name was: gnl|Prokka|MKIECKOO_12); gnlProkkaMKIECKOO_13 (original name was: gnl|Prokka|MKIECKOO_13); gnlProkkaMKIECKOO_15 (original name was: gnl|Prokka|MKIECKOO_15); gnlProkkaMKIECKOO_16 (original name was: gnl|Prokka|MKIECKOO_16); gnlProkkaMKIECKOO_17 (original name was: gnl|Prokka|MKIECKOO_17); gnlProkkaMKIECKOO_19 (original name was: gnl|Prokka|MKIECKOO_19); gnlProkkaMKIECKOO_20 (original name was: gnl|Prokka|MKIECKOO_20); gnlProkkaMKIECKOO_21 (original name was: gnl|Prokka|MKIECKOO_21); gnlProkkaMKIECKOO_22 (original name was: gnl|Prokka|MKIECKOO_22); gnlProkkaMKIECKOO_23 (original name was: gnl|Prokka|MKIECKOO_23); gnlProkkaMKIECKOO_24 (original name was: gnl|Prokka|MKIECKOO_24); gnlProkkaMKIECKOO_25 (original name was: gnl|Prokka|MKIECKOO_25); gnlProkkaMKIECKOO_26 (original name was: gnl|Prokka|MKIECKOO_26); gnlProkkaMKIECKOO_27 (original name was: gnl|Prokka|MKIECKOO_27); gnlProkkaMKIECKOO_28 (original name was: gnl|Prokka|MKIECKOO_28); gnlProkkaMKIECKOO_29 (original name was: gnl|Prokka|MKIECKOO_29); gnlProkkaMKIECKOO_30 (original name was: gnl|Prokka|MKIECKOO_30); gnlProkkaMKIECKOO_31 (original name was: gnl|Prokka|MKIECKOO_31); gnlProkkaMKIECKOO_32 (original name was: gnl|Prokka|MKIECKOO_32); gnlProkkaMKIECKOO_33 (original name was: gnl|Prokka|MKIECKOO_33); gnlProkkaMKIECKOO_34 (original name was: gnl|Prokka|MKIECKOO_34); gnlProkkaMKIECKOO_35 (original name was: gnl|Prokka|MKIECKOO_35); gnlProkkaMKIECKOO_36 (original name was: gnl|Prokka|MKIECKOO_36); gnlProkkaMKIECKOO_37 (original name was: gnl|Prokka|MKIECKOO_37); gnlProkkaMKIECKOO_38 (original name was: gnl|Prokka|MKIECKOO_38); gnlProkkaMKIECKOO_39 (original name was: gnl|Prokka|MKIECKOO_39); gnlProkkaMKIECKOO_40 (original name was: gnl|Prokka|MKIECKOO_40); gnlProkkaMKIECKOO_41 (original name was: gnl|Prokka|MKIECKOO_41); gnlProkkaMKIECKOO_42 (original name was: gnl|Prokka|MKIECKOO_42); gnlProkkaMKIECKOO_43 (original name was: gnl|Prokka|MKIECKOO_43); gnlProkkaMKIECKOO_44 (original name was: gnl|Prokka|MKIECKOO_44); gnlProkkaMKIECKOO_45 (original name was: gnl|Prokka|MKIECKOO_45); gnlProkkaMKIECKOO_46 (original name was: gnl|Prokka|MKIECKOO_46); gnlProkkaMKIECKOO_47 (original name was: gnl|Prokka|MKIECKOO_47); gnlProkkaMKIECKOO_48 (original name was: gnl|Prokka|MKIECKOO_48); gnlProkkaMKIECKOO_49 (original name was: gnl|Prokka|MKIECKOO_49); gnlProkkaMKIECKOO_50 (original name was: gnl|Prokka|MKIECKOO_50); gnlProkkaMKIECKOO_51 (original name was: gnl|Prokka|MKIECKOO_51); gnlProkkaMKIECKOO_52 (original name was: gnl|Prokka|MKIECKOO_52); gnlProkkaMKIECKOO_53 (original name was: gnl|Prokka|MKIECKOO_53); gnlProkkaMKIECKOO_54 (original name was: gnl|Prokka|MKIECKOO_54); gnlProkkaMKIECKOO_55 (original name was: gnl|Prokka|MKIECKOO_55); gnlProkkaMKIECKOO_56 (original name was: gnl|Prokka|MKIECKOO_56); gnlProkkaMKIECKOO_57 (original name was: gnl|Prokka|MKIECKOO_57); gnlProkkaMKIECKOO_58 (original name was: gnl|Prokka|MKIECKOO_58); gnlProkkaMKIECKOO_59 (original name was: gnl|Prokka|MKIECKOO_59); gnlProkkaMKIECKOO_60 (original name was: gnl|Prokka|MKIECKOO_60); gnlProkkaMKIECKOO_61 (original name was: gnl|Prokka|MKIECKOO_61); gnlProkkaMKIECKOO_63 (original name was: gnl|Prokka|MKIECKOO_63); gnlProkkaMKIECKOO_64 (original name was: gnl|Prokka|MKIECKOO_64); gnlProkkaMKIECKOO_65 (original name was: gnl|Prokka|MKIECKOO_65); gnlProkkaMKIECKOO_66 (original name was: gnl|Prokka|MKIECKOO_66); gnlProkkaMKIECKOO_67 (original name was: gnl|Prokka|MKIECKOO_67); gnlProkkaMKIECKOO_68 (original name was: gnl|Prokka|MKIECKOO_68); gnlProkkaMKIECKOO_69 (original name was: gnl|Prokka|MKIECKOO_69); gnlProkkaMKIECKOO_70 (original name was: gnl|Prokka|MKIECKOO_70); gnlProkkaMKIECKOO_71 (original name was: gnl|Prokka|MKIECKOO_71); gnlProkkaMKIECKOO_72 (original name was: gnl|Prokka|MKIECKOO_72); gnlProkkaMKIECKOO_73 (original name was: gnl|Prokka|MKIECKOO_73); gnlProkkaMKIECKOO_74 (original name was: gnl|Prokka|MKIECKOO_74); gnlProkkaMKIECKOO_75 (original name was: gnl|Prokka|MKIECKOO_75); gnlProkkaMKIECKOO_76 (original name was: gnl|Prokka|MKIECKOO_76); gnlProkkaMKIECKOO_77 (original name was: gnl|Prokka|MKIECKOO_77); gnlProkkaMKIECKOO_78 (original name was: gnl|Prokka|MKIECKOO_78); gnlProkkaMKIECKOO_79 (original name was: gnl|Prokka|MKIECKOO_79); gnlProkkaMKIECKOO_80 (original name was: gnl|Prokka|MKIECKOO_80); gnlProkkaMKIECKOO_81 (original name was: gnl|Prokka|MKIECKOO_81); gnlProkkaMKIECKOO_82 (original name was: gnl|Prokka|MKIECKOO_82); gnlProkkaMKIECKOO_83 (original name was: gnl|Prokka|MKIECKOO_83); gnlProkkaMKIECKOO_84 (original name was: gnl|Prokka|MKIECKOO_84); gnlProkkaMKIECKOO_85 (original name was: gnl|Prokka|MKIECKOO_85); gnlProkkaMKIECKOO_86 (original name was: gnl|Prokka|MKIECKOO_86); gnlProkkaMKIECKOO_87 (original name was: gnl|Prokka|MKIECKOO_87); gnlProkkaMKIECKOO_88 (original name was: gnl|Prokka|MKIECKOO_88); gnlProkkaMKIECKOO_89 (original name was: gnl|Prokka|MKIECKOO_89); gnlProkkaMKIECKOO_90 (original name was: gnl|Prokka|MKIECKOO_90); gnlProkkaMKIECKOO_91 (original name was: gnl|Prokka|MKIECKOO_91); gnlProkkaMKIECKOO_92 (original name was: gnl|Prokka|MKIECKOO_92); gnlProkkaMKIECKOO_93 (original name was: gnl|Prokka|MKIECKOO_93); gnlProkkaMKIECKOO_94 (original name was: gnl|Prokka|MKIECKOO_94); gnlProkkaMKIECKOO_95 (original name was: gnl|Prokka|MKIECKOO_95); gnlProkkaMKIECKOO_96 (original name was: gnl|Prokka|MKIECKOO_96); gnlProkkaMKIECKOO_97 (original name was: gnl|Prokka|MKIECKOO_97); gnlProkkaMKIECKOO_98 (original name was: gnl|Prokka|MKIECKOO_98); gnlProkkaMKIECKOO_99 (original name was: gnl|Prokka|MKIECKOO_99); gnlProkkaMKIECKOO_100 (original name was: gnl|Prokka|MKIECKOO_100); gnlProkkaMKIECKOO_101 (original name was: gnl|Prokka|MKIECKOO_101); gnlProkkaMKIECKOO_102 (original name was: gnl|Prokka|MKIECKOO_102); gnlProkkaMKIECKOO_103 (original name was: gnl|Prokka|MKIECKOO_103); gnlProkkaMKIECKOO_104 (original name was: gnl|Prokka|MKIECKOO_104); gnlProkkaMKIECKOO_105 (original name was: gnl|Prokka|MKIECKOO_105); gnlProkkaMKIECKOO_106 (original name was: gnl|Prokka|MKIECKOO_106); gnlProkkaMKIECKOO_107 (original name was: gnl|Prokka|MKIECKOO_107); gnlProkkaMKIECKOO_108 (original name was: gnl|Prokka|MKIECKOO_108); gnlProkkaMKIECKOO_109 (original name was: gnl|Prokka|MKIECKOO_109); gnlProkkaMKIECKOO_110 (original name was: gnl|Prokka|MKIECKOO_110); gnlProkkaMKIECKOO_111 (original name was: gnl|Prokka|MKIECKOO_111); gnlProkkaMKIECKOO_112 (original name was: gnl|Prokka|MKIECKOO_112); gnlProkkaMKIECKOO_113 (original name was: gnl|Prokka|MKIECKOO_113); gnlProkkaMKIECKOO_114 (original name was: gnl|Prokka|MKIECKOO_114); gnlProkkaMKIECKOO_115 (original name was: gnl|Prokka|MKIECKOO_115); gnlProkkaMKIECKOO_116 (original name was: gnl|Prokka|MKIECKOO_116); gnlProkkaMKIECKOO_117 (original name was: gnl|Prokka|MKIECKOO_117); gnlProkkaMKIECKOO_118 (original name was: gnl|Prokka|MKIECKOO_118); gnlProkkaMKIECKOO_119 (original name was: gnl|Prokka|MKIECKOO_119); gnlProkkaMKIECKOO_120 (original name was: gnl|Prokka|MKIECKOO_120); gnlProkkaMKIECKOO_121 (original name was: gnl|Prokka|MKIECKOO_121); gnlProkkaMKIECKOO_122 (original name was: gnl|Prokka|MKIECKOO_122); gnlProkkaMKIECKOO_123 (original name was: gnl|Prokka|MKIECKOO_123); gnlProkkaMKIECKOO_124 (original name was: gnl|Prokka|MKIECKOO_124); gnlProkkaMKIECKOO_125 (original name was: gnl|Prokka|MKIECKOO_125); gnlProkkaMKIECKOO_126 (original name was: gnl|Prokka|MKIECKOO_126); gnlProkkaMKIECKOO_127 (original name was: gnl|Prokka|MKIECKOO_127); gnlProkkaMKIECKOO_128 (original name was: gnl|Prokka|MKIECKOO_128); gnlProkkaMKIECKOO_129 (original name was: gnl|Prokka|MKIECKOO_129); gnlProkkaMKIECKOO_130 (original name was: gnl|Prokka|MKIECKOO_130); gnlProkkaMKIECKOO_131 (original name was: gnl|Prokka|MKIECKOO_131); gnlProkkaMKIECKOO_132 (original name was: gnl|Prokka|MKIECKOO_132); gnlProkkaMKIECKOO_133 (original name was: gnl|Prokka|MKIECKOO_133); gnlProkkaMKIECKOO_134 (original name was: gnl|Prokka|MKIECKOO_134); gnlProkkaMKIECKOO_135 (original name was: gnl|Prokka|MKIECKOO_135); gnlProkkaMKIECKOO_136 (original name was: gnl|Prokka|MKIECKOO_136); gnlProkkaMKIECKOO_137 (original name was: gnl|Prokka|MKIECKOO_137); gnlProkkaMKIECKOO_138 (original name was: gnl|Prokka|MKIECKOO_138); gnlProkkaMKIECKOO_139 (original name was: gnl|Prokka|MKIECKOO_139); gnlProkkaMKIECKOO_140 (original name was: gnl|Prokka|MKIECKOO_140); gnlProkkaMKIECKOO_141 (original name was: gnl|Prokka|MKIECKOO_141); gnlProkkaMKIECKOO_142 (original name was: gnl|Prokka|MKIECKOO_142); gnlProkkaMKIECKOO_143 (original name was: gnl|Prokka|MKIECKOO_143); gnlProkkaMKIECKOO_144 (original name was: gnl|Prokka|MKIECKOO_144); gnlProkkaMKIECKOO_145 (original name was: gnl|Prokka|MKIECKOO_145); gnlProkkaMKIECKOO_146 (original name was: gnl|Prokka|MKIECKOO_146); gnlProkkaMKIECKOO_147 (original name was: gnl|Prokka|MKIECKOO_147); gnlProkkaMKIECKOO_148 (original name was: gnl|Prokka|MKIECKOO_148); gnlProkkaMKIECKOO_149 (original name was: gnl|Prokka|MKIECKOO_149); gnlProkkaMKIECKOO_150 (original name was: gnl|Prokka|MKIECKOO_150); gnlProkkaMKIECKOO_151 (original name was: gnl|Prokka|MKIECKOO_151)

Compact view

gnlProkkaMKIECKOO_1 - Region 1 - lanthipeptide-class-ii

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Location: 1 - 12,669 nt. (total: 12,669 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptide(s) for ctg1_1

allorf_007307_007405

Leader:

MGKAALNEQGCNSREVVLTA

Core:

ARLKPTFCNLTF

Core with dehydrations:

ARLKPDhbFCysNLDhbF

antiSMASH-DB 4.0 matches for allorf_007307_007405

19.2% NZ_KB907258.1: Lanthipeptides: allorf_010568_010702_lanthipeptide

2

RLKPTFCNL

10

R PTFC +

16

RFAPTFCAI

24

allorf_007545_007664

Leader:

MAHPLYGS

Core:

AQKGRTRFALYCVAVILRRFLCQGTYGAAAD

Core with dehydrations:

AQKGRDhbRFALYCysVAVILRRFLCysQGDhbYGAAAD

antiSMASH-DB 4.0 matches for allorf_007545_007664

22.6% NZ_KB912942.1: Lanthipeptides: AMYBE_RS44660_lanthipeptide

3

KGRTRFALYCVAVILRRFLCQ

23

G + F+L+C L LC

4

HGHSHFSLHCGDSTLSLLLCD

24

12.0% NZ_RYYV01000004.1: Lanthipeptides: allorf_108229_108468_lanthipeptide

1

AQKGRTRFALYCVAVILRR

19

+ + T + C+A +LRR

31

SSQAETTLSFCCIAELLRR

49

allorf_007561_007686

Leader:

MARRKKDVPGL

Core:

PYTASPLSCVAFFVKEHTGLLRIDTKRKRG

Core with dehydrations:

PYDhbADhaPLDhaCysVAFFVKEHDhbGLLRIDDhbKRKRG

antiSMASH-DB 4.0 matches for allorf_007561_007686

25.8% NZ_MSRJ01000005.1: Lanthipeptides: allorf_215951_216079_lanthipeptide

7

LSCVAFFVKEHTGL

20

L C A FVK GL

17

LVCQAVFVKMKLGL

30

16.7% NC_009727.1and 1 other:

NZ_LK937696.1 Lanthipeptides: allorf_1081979_1082068_lanthipeptide

Lanthipeptides: allorf_1214590_1214679_lanthipeptide

1

PYTASPLSC

9

P++ SP+SC

1

PHSRSPISC

9

allorf_008562_008687

Leader:

MEVAAMIYRAYRQSTAHFS

Core:

LSKKARPPPGTLLPSYMNCQII

Core with dehydrations:

LDhaKKARPPPGDhbLLPDhaYMNCysQII

MIBiG 3.1 matches for allorf_008562_008687

11.8% BGC0000535 (ADJ56352.1): Lanthipeptide: nisin A

8

PPGTLLPSYMNCQI

21

PG + M C +

8

TPGCKTGALMGCNM

21

antiSMASH-DB 4.0 matches for allorf_008562_008687

22.7% NZ_CP026729.1: Lanthipeptides: allorf_1517053_1517127_lanthipeptide

11

TLLPSYMNC

19

T+LPS+ +C

1

TILPSWQSC

9

15.4% NZ_SBIS02000011.1: Lanthipeptides: allorf_232888_233061_lanthipeptide

7

PPPGTLLPSYMNC

19

PP G+ PS+ C

1

PPEGSAHPSHYLC

13

14.3% NZ_CP050504.1: Lanthipeptides: allorf_0161193_0161369_lanthipeptide

8

PPGTLLPSYMNCQI

21

P GT P Y +C+

10

PCGTACPGYEHCRA

23

with 1 more sequence matches

11.8% NZ_JADMPO010000001.1: Lanthipeptides: allorf_303731_303931_lanthipeptide

5

ARPPPGTLLP

14

PPPG LP

15

CSPPPGCYLP

24

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lanthipeptides

Core peptide predictions

allorf_007307_007405 - Class II

Cleavage pHMM score: -6.50

RODEO score: 0

Monoisotopic mass: 1373.7 Da

Molecular weight: 1374.6 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 1392.7 Da N = 1

allorf_007545_007664 - Class II

Cleavage pHMM score: -6.50

RODEO score: 0

Monoisotopic mass: 3381.8 Da

Molecular weight: 3383.9 Da

Number of bridges: 2

allorf_007561_007686 - Class II

Cleavage pHMM score: -7.20

RODEO score: 0

Monoisotopic mass: 3299.8 Da

Molecular weight: 3301.8 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 3319.9 Da N = 1; 3337.9 Da N = 2; 3355.9 Da N = 3; 3373.9 Da N = 4

allorf_008562_008687 - Class II

Cleavage pHMM score: -6.40

RODEO score: 0

Monoisotopic mass: 2372.3 Da

Molecular weight: 2373.9 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 2391.9 Da N = 1; 2409.9 Da N = 2

gnlProkkaMKIECKOO_14 - Region 1 - NRPS

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Location: 1,615 - 50,599 nt. (total: 48,985 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

Module view

Legend

NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 1614 - 50599:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg14_22

AMP-binding (20..419): X

nrpys: Leu, Trp

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLTDGGISK
Nearest Stachelhaus code(s):: Leu or Trp DVLTDGGISK (100% 8Å match)
Stachelhaus code match:: 100% (strong)

AMP-binding (1033..1421): X

nrpys: Leu, Trp

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAMFSGAIFK
Nearest Stachelhaus code(s):: Leu or Trp DAMFSGAIFK (85% 8Å match)
Stachelhaus code match:: 100% (strong)

AMP-binding (2027..2418): X

nrpys: Leu, Trp

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAITTGGVSK
Nearest Stachelhaus code(s):: Leu or Trp DAITTGGVSK (100% 8Å match)
Stachelhaus code match:: 100% (strong)

gnlProkkaMKIECKOO_18 - Region 1 - ranthipeptide

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Location: 28,477 - 50,065 nt. (total: 21,589 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMKIECKOO_62 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 19,737 nt. (total: 19,737 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.