GCA_958432145.1 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMEDPMIKA_34 (original name was: gnl|Prokka|MEDPMIKA_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	RRE-containing	3,605	23,877

No secondary metabolite regions were found in these records:: gnlProkkaMEDPMIKA_1 (original name was: gnl|Prokka|MEDPMIKA_1); gnlProkkaMEDPMIKA_2 (original name was: gnl|Prokka|MEDPMIKA_2); gnlProkkaMEDPMIKA_3 (original name was: gnl|Prokka|MEDPMIKA_3); gnlProkkaMEDPMIKA_4 (original name was: gnl|Prokka|MEDPMIKA_4); gnlProkkaMEDPMIKA_5 (original name was: gnl|Prokka|MEDPMIKA_5); gnlProkkaMEDPMIKA_6 (original name was: gnl|Prokka|MEDPMIKA_6); gnlProkkaMEDPMIKA_7 (original name was: gnl|Prokka|MEDPMIKA_7); gnlProkkaMEDPMIKA_8 (original name was: gnl|Prokka|MEDPMIKA_8); gnlProkkaMEDPMIKA_9 (original name was: gnl|Prokka|MEDPMIKA_9); gnlProkkaMEDPMIKA_10 (original name was: gnl|Prokka|MEDPMIKA_10); gnlProkkaMEDPMIKA_11 (original name was: gnl|Prokka|MEDPMIKA_11); gnlProkkaMEDPMIKA_12 (original name was: gnl|Prokka|MEDPMIKA_12); gnlProkkaMEDPMIKA_13 (original name was: gnl|Prokka|MEDPMIKA_13); gnlProkkaMEDPMIKA_14 (original name was: gnl|Prokka|MEDPMIKA_14); gnlProkkaMEDPMIKA_15 (original name was: gnl|Prokka|MEDPMIKA_15); gnlProkkaMEDPMIKA_16 (original name was: gnl|Prokka|MEDPMIKA_16); gnlProkkaMEDPMIKA_17 (original name was: gnl|Prokka|MEDPMIKA_17); gnlProkkaMEDPMIKA_18 (original name was: gnl|Prokka|MEDPMIKA_18); gnlProkkaMEDPMIKA_19 (original name was: gnl|Prokka|MEDPMIKA_19); gnlProkkaMEDPMIKA_20 (original name was: gnl|Prokka|MEDPMIKA_20); gnlProkkaMEDPMIKA_21 (original name was: gnl|Prokka|MEDPMIKA_21); gnlProkkaMEDPMIKA_22 (original name was: gnl|Prokka|MEDPMIKA_22); gnlProkkaMEDPMIKA_23 (original name was: gnl|Prokka|MEDPMIKA_23); gnlProkkaMEDPMIKA_24 (original name was: gnl|Prokka|MEDPMIKA_24); gnlProkkaMEDPMIKA_25 (original name was: gnl|Prokka|MEDPMIKA_25); gnlProkkaMEDPMIKA_26 (original name was: gnl|Prokka|MEDPMIKA_26); gnlProkkaMEDPMIKA_27 (original name was: gnl|Prokka|MEDPMIKA_27); gnlProkkaMEDPMIKA_28 (original name was: gnl|Prokka|MEDPMIKA_28); gnlProkkaMEDPMIKA_29 (original name was: gnl|Prokka|MEDPMIKA_29); gnlProkkaMEDPMIKA_30 (original name was: gnl|Prokka|MEDPMIKA_30); gnlProkkaMEDPMIKA_31 (original name was: gnl|Prokka|MEDPMIKA_31); gnlProkkaMEDPMIKA_32 (original name was: gnl|Prokka|MEDPMIKA_32); gnlProkkaMEDPMIKA_33 (original name was: gnl|Prokka|MEDPMIKA_33); gnlProkkaMEDPMIKA_35 (original name was: gnl|Prokka|MEDPMIKA_35); gnlProkkaMEDPMIKA_36 (original name was: gnl|Prokka|MEDPMIKA_36); gnlProkkaMEDPMIKA_37 (original name was: gnl|Prokka|MEDPMIKA_37); gnlProkkaMEDPMIKA_38 (original name was: gnl|Prokka|MEDPMIKA_38); gnlProkkaMEDPMIKA_39 (original name was: gnl|Prokka|MEDPMIKA_39); gnlProkkaMEDPMIKA_40 (original name was: gnl|Prokka|MEDPMIKA_40); gnlProkkaMEDPMIKA_41 (original name was: gnl|Prokka|MEDPMIKA_41); gnlProkkaMEDPMIKA_42 (original name was: gnl|Prokka|MEDPMIKA_42); gnlProkkaMEDPMIKA_43 (original name was: gnl|Prokka|MEDPMIKA_43); gnlProkkaMEDPMIKA_44 (original name was: gnl|Prokka|MEDPMIKA_44); gnlProkkaMEDPMIKA_45 (original name was: gnl|Prokka|MEDPMIKA_45); gnlProkkaMEDPMIKA_46 (original name was: gnl|Prokka|MEDPMIKA_46)

Compact view

gnlProkkaMEDPMIKA_34 - Region 1 - RRE-containing

Download region GenBank file

Download region SVG

Location: 3,605 - 23,877 nt. (total: 20,273 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.