GCA_958435485.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKODOIODJ_1 (original name was: gnl|Prokka|KODOIODJ_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	ranthipeptide	70,015	91,634

gnlProkkaKODOIODJ_11 (original name was: gnl|Prokka|KODOIODJ_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RRE-containing	26,412	46,669
Region 11.2	RRE-containing	49,186	70,328

Region	Type	From	To	Similarity
Region 1.1	ranthipeptide	70,015	91,634
Region 11.1	RRE-containing	26,412	46,669
Region 11.2	RRE-containing	49,186	70,328

No secondary metabolite regions were found in these records:: gnlProkkaKODOIODJ_2 (original name was: gnl|Prokka|KODOIODJ_2); gnlProkkaKODOIODJ_3 (original name was: gnl|Prokka|KODOIODJ_3); gnlProkkaKODOIODJ_4 (original name was: gnl|Prokka|KODOIODJ_4); gnlProkkaKODOIODJ_5 (original name was: gnl|Prokka|KODOIODJ_5); gnlProkkaKODOIODJ_6 (original name was: gnl|Prokka|KODOIODJ_6); gnlProkkaKODOIODJ_7 (original name was: gnl|Prokka|KODOIODJ_7); gnlProkkaKODOIODJ_8 (original name was: gnl|Prokka|KODOIODJ_8); gnlProkkaKODOIODJ_9 (original name was: gnl|Prokka|KODOIODJ_9); gnlProkkaKODOIODJ_10 (original name was: gnl|Prokka|KODOIODJ_10); gnlProkkaKODOIODJ_12 (original name was: gnl|Prokka|KODOIODJ_12); gnlProkkaKODOIODJ_13 (original name was: gnl|Prokka|KODOIODJ_13); gnlProkkaKODOIODJ_14 (original name was: gnl|Prokka|KODOIODJ_14); gnlProkkaKODOIODJ_15 (original name was: gnl|Prokka|KODOIODJ_15); gnlProkkaKODOIODJ_16 (original name was: gnl|Prokka|KODOIODJ_16); gnlProkkaKODOIODJ_17 (original name was: gnl|Prokka|KODOIODJ_17); gnlProkkaKODOIODJ_18 (original name was: gnl|Prokka|KODOIODJ_18); gnlProkkaKODOIODJ_19 (original name was: gnl|Prokka|KODOIODJ_19); gnlProkkaKODOIODJ_20 (original name was: gnl|Prokka|KODOIODJ_20); gnlProkkaKODOIODJ_21 (original name was: gnl|Prokka|KODOIODJ_21); gnlProkkaKODOIODJ_22 (original name was: gnl|Prokka|KODOIODJ_22); gnlProkkaKODOIODJ_23 (original name was: gnl|Prokka|KODOIODJ_23); gnlProkkaKODOIODJ_24 (original name was: gnl|Prokka|KODOIODJ_24); gnlProkkaKODOIODJ_25 (original name was: gnl|Prokka|KODOIODJ_25); gnlProkkaKODOIODJ_26 (original name was: gnl|Prokka|KODOIODJ_26); gnlProkkaKODOIODJ_27 (original name was: gnl|Prokka|KODOIODJ_27); gnlProkkaKODOIODJ_28 (original name was: gnl|Prokka|KODOIODJ_28); gnlProkkaKODOIODJ_29 (original name was: gnl|Prokka|KODOIODJ_29); gnlProkkaKODOIODJ_30 (original name was: gnl|Prokka|KODOIODJ_30); gnlProkkaKODOIODJ_31 (original name was: gnl|Prokka|KODOIODJ_31); gnlProkkaKODOIODJ_32 (original name was: gnl|Prokka|KODOIODJ_32); gnlProkkaKODOIODJ_33 (original name was: gnl|Prokka|KODOIODJ_33); gnlProkkaKODOIODJ_34 (original name was: gnl|Prokka|KODOIODJ_34); gnlProkkaKODOIODJ_35 (original name was: gnl|Prokka|KODOIODJ_35); gnlProkkaKODOIODJ_36 (original name was: gnl|Prokka|KODOIODJ_36); gnlProkkaKODOIODJ_37 (original name was: gnl|Prokka|KODOIODJ_37); gnlProkkaKODOIODJ_38 (original name was: gnl|Prokka|KODOIODJ_38); gnlProkkaKODOIODJ_39 (original name was: gnl|Prokka|KODOIODJ_39); gnlProkkaKODOIODJ_40 (original name was: gnl|Prokka|KODOIODJ_40); gnlProkkaKODOIODJ_41 (original name was: gnl|Prokka|KODOIODJ_41); gnlProkkaKODOIODJ_42 (original name was: gnl|Prokka|KODOIODJ_42); gnlProkkaKODOIODJ_43 (original name was: gnl|Prokka|KODOIODJ_43); gnlProkkaKODOIODJ_44 (original name was: gnl|Prokka|KODOIODJ_44); gnlProkkaKODOIODJ_45 (original name was: gnl|Prokka|KODOIODJ_45); gnlProkkaKODOIODJ_46 (original name was: gnl|Prokka|KODOIODJ_46); gnlProkkaKODOIODJ_47 (original name was: gnl|Prokka|KODOIODJ_47); gnlProkkaKODOIODJ_48 (original name was: gnl|Prokka|KODOIODJ_48); gnlProkkaKODOIODJ_49 (original name was: gnl|Prokka|KODOIODJ_49); gnlProkkaKODOIODJ_50 (original name was: gnl|Prokka|KODOIODJ_50); gnlProkkaKODOIODJ_51 (original name was: gnl|Prokka|KODOIODJ_51); gnlProkkaKODOIODJ_52 (original name was: gnl|Prokka|KODOIODJ_52); gnlProkkaKODOIODJ_53 (original name was: gnl|Prokka|KODOIODJ_53); gnlProkkaKODOIODJ_54 (original name was: gnl|Prokka|KODOIODJ_54); gnlProkkaKODOIODJ_55 (original name was: gnl|Prokka|KODOIODJ_55); gnlProkkaKODOIODJ_56 (original name was: gnl|Prokka|KODOIODJ_56); gnlProkkaKODOIODJ_57 (original name was: gnl|Prokka|KODOIODJ_57); gnlProkkaKODOIODJ_58 (original name was: gnl|Prokka|KODOIODJ_58); gnlProkkaKODOIODJ_59 (original name was: gnl|Prokka|KODOIODJ_59); gnlProkkaKODOIODJ_60 (original name was: gnl|Prokka|KODOIODJ_60); gnlProkkaKODOIODJ_61 (original name was: gnl|Prokka|KODOIODJ_61); gnlProkkaKODOIODJ_62 (original name was: gnl|Prokka|KODOIODJ_62); gnlProkkaKODOIODJ_63 (original name was: gnl|Prokka|KODOIODJ_63); gnlProkkaKODOIODJ_64 (original name was: gnl|Prokka|KODOIODJ_64); gnlProkkaKODOIODJ_65 (original name was: gnl|Prokka|KODOIODJ_65); gnlProkkaKODOIODJ_66 (original name was: gnl|Prokka|KODOIODJ_66); gnlProkkaKODOIODJ_67 (original name was: gnl|Prokka|KODOIODJ_67); gnlProkkaKODOIODJ_68 (original name was: gnl|Prokka|KODOIODJ_68); gnlProkkaKODOIODJ_69 (original name was: gnl|Prokka|KODOIODJ_69); gnlProkkaKODOIODJ_70 (original name was: gnl|Prokka|KODOIODJ_70); gnlProkkaKODOIODJ_71 (original name was: gnl|Prokka|KODOIODJ_71); gnlProkkaKODOIODJ_72 (original name was: gnl|Prokka|KODOIODJ_72); gnlProkkaKODOIODJ_73 (original name was: gnl|Prokka|KODOIODJ_73); gnlProkkaKODOIODJ_74 (original name was: gnl|Prokka|KODOIODJ_74); gnlProkkaKODOIODJ_75 (original name was: gnl|Prokka|KODOIODJ_75)

Compact view

gnlProkkaKODOIODJ_1 - Region 1 - ranthipeptide

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Location: 70,015 - 91,634 nt. (total: 21,620 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKODOIODJ_11 - Region 1 - RRE-containing

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Location: 26,412 - 46,669 nt. (total: 20,258 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKODOIODJ_11 - Region 2 - RRE-containing

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Location: 49,186 - 70,328 nt. (total: 21,143 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.