GCA_959019245.1 - 8 region(s)

Identified primary metabolite regions

c00001_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 1.1	OD_fatty_acids	Putative	1	17,301

c00004_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_4)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 4.1	Pyruvate2acetate-formate	SCFA	2,652	25,701	Pyruvate to acetate-formate B. thetaiotaomicron	PFL_acetate	100%

c00014_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_14)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 14.1	Rnf_complex	E-MGC	5,809	31,136	Rnf complex C. sporogenes	RNF	83%

c00015_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_15)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 15.1	Fumarate2succinate	SCFA	25,601	46,058	Fumarate to succinate B. thetaiotaomicron	SUC	100%

c00020_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_20)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 20.1	NADH_dehydrogenase_I	E-MGC	14,014	38,238	NADH dehydrogenase I Bacteroides sp.	NADHD	47%

c00063_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_63)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 63.1	succinate2propionate	SCFA	1,772	17,953	Succinate to propionate A. sp. KLE1797	SUC	57%

c00064_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_64)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 64.1	TPP_AA_metabolism	Putative	1,055	17,852

c00077_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_77)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 77.1	porA	SCFA	1,750	14,529	porA C. sporogenes	POR	60%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 1.1	OD_fatty_acids	Putative	1	17,301
Region 4.1	Pyruvate2acetate-formate	SCFA	2,652	25,701	Pyruvate to acetate-formate B. thetaiotaomicron	PFL_acetate	100%
Region 14.1	Rnf_complex	E-MGC	5,809	31,136	Rnf complex C. sporogenes	RNF	83%
Region 15.1	Fumarate2succinate	SCFA	25,601	46,058	Fumarate to succinate B. thetaiotaomicron	SUC	100%
Region 20.1	NADH_dehydrogenase_I	E-MGC	14,014	38,238	NADH dehydrogenase I Bacteroides sp.	NADHD	47%
Region 63.1	succinate2propionate	SCFA	1,772	17,953	Succinate to propionate A. sp. KLE1797	SUC	57%
Region 64.1	TPP_AA_metabolism	Putative	1,055	17,852
Region 77.1	porA	SCFA	1,750	14,529	porA C. sporogenes	POR	60%

No primary metabolite regions were found in these records:: c00002_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_2); c00003_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_3); c00005_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_5); c00006_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_6); c00007_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_7); c00008_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_8); c00009_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_9); c00010_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_10); c00011_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_11); c00012_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_12); c00013_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_13); c00016_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_16); c00017_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_17); c00018_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_18); c00019_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_19); c00021_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_21); c00022_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_22); c00023_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_23); c00024_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_24); c00025_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_25); c00026_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_26); c00027_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_27); c00028_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_28); c00029_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_29); c00030_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_30); c00031_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_31); c00032_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_32); c00033_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_33); c00034_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_34); c00035_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_35); c00036_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_36); c00037_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_37); c00038_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_38); c00039_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_39); c00040_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_40); c00041_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_41); c00042_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_42); c00043_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_43); c00044_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_44); c00045_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_45); c00046_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_46); c00047_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_47); c00048_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_48); c00049_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_49); c00050_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_50); c00051_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_51); c00052_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_52); c00053_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_53); c00054_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_54); c00055_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_55); c00056_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_56); c00057_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_57); c00058_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_58); c00059_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_59); c00060_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_60); c00061_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_61); c00062_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_62); c00065_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_65); c00066_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_66); c00067_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_67); c00068_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_68); c00069_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_69); c00070_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_70); c00071_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_71); c00072_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_72); c00073_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_73); c00074_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_74); c00075_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_75); c00076_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_76); c00078_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_78); c00079_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_79); c00080_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_80); c00081_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_81); c00082_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_82); c00083_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_83); c00084_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_84); c00085_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_85); c00086_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_86); c00087_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_87); c00088_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_88); c00089_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_89); c00090_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_90); c00091_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_91); c00092_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_92); c00093_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_93); c00094_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_94); c00095_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_95); c00096_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_96); c00097_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_97); c00098_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_98); c00099_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_99); c00100_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_100); c00101_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_101); c00102_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_102); c00103_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_103); c00104_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_104); c00105_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_105); c00106_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_106); c00107_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_107); c00108_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_108); c00109_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_109); c00110_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_110); c00111_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_111); c00112_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_112); c00113_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_113); c00114_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_114); c00115_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_115); c00116_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_116); c00117_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_117); c00118_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_118); c00119_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_119); c00120_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_120); c00121_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_121); c00122_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_122); c00123_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_123); c00124_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_124); c00125_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_125); c00126_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_126); c00127_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_127); c00128_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_128); c00129_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_129); c00130_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_130); c00131_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_131); c00132_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_132); c00133_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_133); c00134_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_134); c00135_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_135); c00136_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_136); c00137_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_137); c00138_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_138); c00139_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_139); c00140_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_140); c00141_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_141); c00142_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_142); c00143_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_143); c00144_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_144); c00145_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_145); c00146_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_146); c00147_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_147); c00148_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_148); c00149_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_149); c00150_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_150); c00151_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_151); c00152_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_152); c00153_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_153); c00154_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_154); c00155_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_155); c00156_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_156); c00157_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_157); c00158_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_158); c00159_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_159); c00160_gnlPro.. (original name was: gnl|Prokka|OCCKCGJO_160)

Compact view

c00001_gnlPro.. - Region 1 - OD_fatty_acids

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Location: 1 - 17,301 nt. (total: 17,301 nt) Show pHMM detection rules used

Region on contig edge.

OD_fatty_acids: (minimum(1, [PFOR_II, POR, POR_N]) and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (Gly_radical_scatole or Gly_radical or Gly_430_pcre or Gly_8-9_TMA))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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KnownClusterBlast

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No matches found.

c00004_gnlPro.. - Region 1 - Pyruvate2acetate-formate

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Location: 2,652 - 25,701 nt. (total: 23,050 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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KnownClusterBlast

Similar known gene clusters

c00014_gnlPro.. - Region 1 - Rnf_complex

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Location: 5,809 - 31,136 nt. (total: 25,328 nt) Show pHMM detection rules used

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00015_gnlPro.. - Region 1 - Fumarate2succinate

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Location: 25,601 - 46,058 nt. (total: 20,458 nt) Show pHMM detection rules used

Region on contig edge.

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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Similar known gene clusters

c00020_gnlPro.. - Region 1 - NADH_dehydrogenase_I

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Location: 14,014 - 38,238 nt. (total: 24,225 nt) Show pHMM detection rules used

Region on contig edge.

NADH_dehydrogenase_I: (Oxidored_q4 and Oxidored_q6 and Complex1_30kDa and Complex1_49kDa and NADHdh and Oxidored_q3 and Oxidored_q2 and minimum(4, [Fe-2S_thioredx, Fer2_4, Fer4_7, Molybdop_Fe4S4, Molydop_binding, NADH-G_4Fe-4S_3, NADH_4Fe-4S, Proton_antipo_M, Proton_antipo_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00063_gnlPro.. - Region 1 - succinate2propionate

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Location: 1,772 - 17,953 nt. (total: 16,182 nt) Show pHMM detection rules used

Region on contig edge.

succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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c00064_gnlPro.. - Region 1 - TPP_AA_metabolism

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Location: 1,055 - 17,852 nt. (total: 16,798 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

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c00077_gnlPro.. - Region 1 - porA

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Location: 1,750 - 14,529 nt. (total: 12,780 nt) Show pHMM detection rules used

Region on contig edge.

porA: (Fer4_7 and TPP_enzyme_C and POR and POR_N and PFOR_II and not (EKR or Fer4_16))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters