GCA_959020695.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNFKBJPGK_1 (original name was: gnl|Prokka|NFKBJPGK_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RRE-containing	717,399	738,186

gnlProkkaNFKBJPGK_2 (original name was: gnl|Prokka|NFKBJPGK_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	197,589	209,760
Region 2.2	arylpolyene	389,804	437,315	flexirubin	Other	36%

gnlProkkaNFKBJPGK_5 (original name was: gnl|Prokka|NFKBJPGK_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	betalactone	154,169	179,649	legionaminic acid	Other	25%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	RRE-containing	717,399	738,186
Region 2.1	RiPP-like	197,589	209,760
Region 2.2	arylpolyene	389,804	437,315	flexirubin	Other	36%
Region 5.1	betalactone	154,169	179,649	legionaminic acid	Other	25%

No secondary metabolite regions were found in these records:: gnlProkkaNFKBJPGK_3 (original name was: gnl|Prokka|NFKBJPGK_3); gnlProkkaNFKBJPGK_4 (original name was: gnl|Prokka|NFKBJPGK_4); gnlProkkaNFKBJPGK_6 (original name was: gnl|Prokka|NFKBJPGK_6); gnlProkkaNFKBJPGK_7 (original name was: gnl|Prokka|NFKBJPGK_7); gnlProkkaNFKBJPGK_8 (original name was: gnl|Prokka|NFKBJPGK_8); gnlProkkaNFKBJPGK_9 (original name was: gnl|Prokka|NFKBJPGK_9); gnlProkkaNFKBJPGK_10 (original name was: gnl|Prokka|NFKBJPGK_10); gnlProkkaNFKBJPGK_11 (original name was: gnl|Prokka|NFKBJPGK_11); gnlProkkaNFKBJPGK_12 (original name was: gnl|Prokka|NFKBJPGK_12); gnlProkkaNFKBJPGK_13 (original name was: gnl|Prokka|NFKBJPGK_13); gnlProkkaNFKBJPGK_14 (original name was: gnl|Prokka|NFKBJPGK_14); gnlProkkaNFKBJPGK_15 (original name was: gnl|Prokka|NFKBJPGK_15); gnlProkkaNFKBJPGK_16 (original name was: gnl|Prokka|NFKBJPGK_16); gnlProkkaNFKBJPGK_17 (original name was: gnl|Prokka|NFKBJPGK_17); gnlProkkaNFKBJPGK_18 (original name was: gnl|Prokka|NFKBJPGK_18); gnlProkkaNFKBJPGK_19 (original name was: gnl|Prokka|NFKBJPGK_19); gnlProkkaNFKBJPGK_20 (original name was: gnl|Prokka|NFKBJPGK_20); gnlProkkaNFKBJPGK_21 (original name was: gnl|Prokka|NFKBJPGK_21); gnlProkkaNFKBJPGK_22 (original name was: gnl|Prokka|NFKBJPGK_22); gnlProkkaNFKBJPGK_23 (original name was: gnl|Prokka|NFKBJPGK_23); gnlProkkaNFKBJPGK_24 (original name was: gnl|Prokka|NFKBJPGK_24); gnlProkkaNFKBJPGK_25 (original name was: gnl|Prokka|NFKBJPGK_25); gnlProkkaNFKBJPGK_26 (original name was: gnl|Prokka|NFKBJPGK_26); gnlProkkaNFKBJPGK_27 (original name was: gnl|Prokka|NFKBJPGK_27); gnlProkkaNFKBJPGK_28 (original name was: gnl|Prokka|NFKBJPGK_28); gnlProkkaNFKBJPGK_29 (original name was: gnl|Prokka|NFKBJPGK_29); gnlProkkaNFKBJPGK_30 (original name was: gnl|Prokka|NFKBJPGK_30); gnlProkkaNFKBJPGK_31 (original name was: gnl|Prokka|NFKBJPGK_31); gnlProkkaNFKBJPGK_32 (original name was: gnl|Prokka|NFKBJPGK_32); gnlProkkaNFKBJPGK_33 (original name was: gnl|Prokka|NFKBJPGK_33); gnlProkkaNFKBJPGK_34 (original name was: gnl|Prokka|NFKBJPGK_34); gnlProkkaNFKBJPGK_35 (original name was: gnl|Prokka|NFKBJPGK_35)

Compact view

gnlProkkaNFKBJPGK_1 - Region 1 - RRE-containing

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Location: 717,399 - 738,186 nt. (total: 20,788 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNFKBJPGK_2 - Region 1 - RiPP-like

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Location: 197,589 - 209,760 nt. (total: 12,172 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNFKBJPGK_2 - Region 2 - arylpolyene

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Location: 389,804 - 437,315 nt. (total: 47,512 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

gnlProkkaNFKBJPGK_5 - Region 1 - betalactone

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Location: 154,169 - 179,649 nt. (total: 25,481 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1