Genome ID：GCA_021991685.1

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PCFPDMBM_34	44854	45771	speB	0.0	agmatinase	99.02	100.00	AAC75974
PCFPDMBM_34	214127	215116	RpoS	0.0	RNA polymerase sigma factor	98.18	100.00	BAA02747
PCFPDMBM_2	40092	41093	fruR	0.0	regulators of systemic infection	97.31	100.00	CRA_SALTY
PCFPDMBM_7	7847	6933	oxyR	0.0	regulatory protein sensor for oxidative stress	96.72	100.00	AAL22963
PCFPDMBM_7	49657	51027	cpxA	0.0	two-component sensor kinase	96.28	100.00	CBG90543
PCFPDMBM_12	172693	170930	sdhA	0.0	succinate dehydrogenase flavoprotein subunit	96.26	100.00	AAA23895
PCFPDMBM_35	133325	131217	spoT	0.0	(P)ppGpp synthetase	96.16	100.00	AKH09371
PCFPDMBM_36	114048	116117	pnp	0.0	polynucleotide phosphorylase, an exoribonuclease involved in RNA processing and degradation	96.09	97.05	AAL22154
PCFPDMBM_35	133325	131217	SpoT	0.0	bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	96.02	100.00	AAO71259
PCFPDMBM_23	387726	386680	cheB	0.0	chemotaxis	95.99	100.00	AAL20833
PCFPDMBM_37	154128	152788	rarA	0.0	Holliday junction DNA helicase	95.75	100.00	SAS94147
PCFPDMBM_7	94114	95520	glnA	0.0	glutamine synthetase	95.74	100.00	AAL22846
PCFPDMBM_7	7847	6933	OxyR	0.0	oxidative stress response regulator	95.74	100.00	BAI33414
PCFPDMBM_37	178345	179994	hcp	0.0	hydroxylamine reductase	95.64	100.00	AAC73960
PCFPDMBM_33	248752	246653	pta	0.0	phosphate acetyltransferase	95.57	98.04	QPQ68955
PCFPDMBM_12	156482	155193	tolB	0.0	colicin import protein	95.35	100.00	CBG87511
PCFPDMBM_23	146339	147796	clsA	0.0	cardiolipin synthase A	95.27	100.00	AAL20657
PCFPDMBM_4	98821	100050	envZ	0.0	regulators of systemic infection	95.12	91.11	ENVZ_SALTY
PCFPDMBM_10	4424	5707	dctA	0.0	primary dicarboxylate importer	95.09	100.00	CAA62742
PCFPDMBM_12	312474	310768	STM14_RS15285	0.0	formate hydrogenlyase subunit 4	95.08	100.00	ACY89857
PCFPDMBM_23	173750	170010	narG	0.0	respiratory nitrate reductase 1 alpha chain	94.79	100.00	CAA34303
PCFPDMBM_1	203118	204602	sufB	0.0	sulfur mobilization	94.55	100.00	ACY88142
PCFPDMBM_3	68849	69745	prt	0.0	OAg biosynthesis	94.31	100.00	CAR33649
PCFPDMBM_36	123702	122710	yhbU	0.0	ubiquinone biosynthesis protein	94.26	100.00	ARA47379
PCFPDMBM_23	384201	382126	flhA	0.0	flagellar biosynthesis protein	94.22	100.00	AAL20829
PCFPDMBM_2	33982	32894	leuB	0.0	3-isopropylmalate dehydrogenase	94.22	100.00	AIT01852
PCFPDMBM_5	31447	32742	purA	0.0	pathogenicity island	94.21	100.00	AAL23186
PCFPDMBM_2	35553	33985	leuA	0.0	2-isopropylmalate synthase	94.07	100.00	ACI08908
PCFPDMBM_2	32888	31491	leuC	0.0	3-isopropylmalate dehydratase large subunit	93.99	100.00	AIT01851
PCFPDMBM_12	326306	327391	VK055_1939	0.0	branched-chain amino acid transport system/permease component family protein	93.92	100.00	AIK80545
PCFPDMBM_6	72651	73961	gltP	0.0	glutamate transporters	93.59	100.00	AAA24323
PCFPDMBM_33	107236	105179	ppk1	0.0	polyphosphate kinase 1	93.46	99.85	ACI80066
PCFPDMBM_38	120090	122240	yjiY	0.0	peptide-utilizing carbon starvation protein	93.44	100.00	AAL23350
PCFPDMBM_12	333016	334404	VK055_1944	0.0	L-fucose isomerase, C-terminal domain protein	93.31	100.00	AIK80550
PCFPDMBM_1	288389	290029	fumA	0.0	fumarate hydratase class I, aerobic	93.24	94.31	AAL20388
PCFPDMBM_33	93017	94480	guaB	0.0	inosine-5'-monophosphate dehydrogenase	93.03	100.00	CBA21987
PCFPDMBM_12	266932	264830	cstA	0.0	peptide-utilizing carbon starvation protein	93.01	100.00	AAL19551
PCFPDMBM_35	47197	45785	tnaA	0.0	tryptophanase	92.99	100.00	AAA24676
PCFPDMBM_34	239696	238266	STM14_RS15240	0.0	NADH:flavorubredoxin reductase	92.87	99.37	ACY89845
PCFPDMBM_23	161138	160233	GalU	0.0	uridine diphosphate–glucose pyrophosphorylase	92.72	100.00	EDG7028553
PCFPDMBM_34	183872	186094	relA	0.0	(P)ppGpp synthetase I	92.72	99.46	AAL21836
PCFPDMBM_34	183872	186094	RelA	0.0	GTP pyrophosphokinase	92.72	99.46	AAO70421
PCFPDMBM_2	91649	90801	speE	0.0	polyamine aminopropyltransferase	92.58	98.26	AAC73232
PCFPDMBM_2	33982	32894	LeuB	0.0	3-isopropylmalate dehydrogenase	92.56	100.00	ACH50288
PCFPDMBM_23	170010	168481	narH	0.0	respiratory nitrate reductase 1 beta chain	92.56	99.61	CAA34304
PCFPDMBM_6	72230	70281	acs	0.0	acetyl-coenzyme A synthetase	92.46	99.69	AAC43163
PCFPDMBM_33	130257	127153	acrD	0.0	resistance-nodulation-cell division (RND) transporter	92.27	99.81	QUZ94265
PCFPDMBM_6	69828	68182	actP	0.0	acetate/glycolate:cation symporter	92.17	100.00	AAC77037
PCFPDMBM_33	130257	127153	AcrD	0.0	tripartite complex	92.17	99.81	AAN44015
PCFPDMBM_12	424667	427804	acrB	0.0	acriflavine resistance protein	92.16	99.71	CDO13174
PCFPDMBM_12	424667	427804	AcrB	0.0	tripartite complex	92.16	99.71	AAN42062
PCFPDMBM_12	458275	455891	lon	0.0	protease	92.08	100.89	AUC44067
PCFPDMBM_34	214127	215116	rpoS	0.0	RNA polymerase sigma factor	91.82	100.00	ACT14364
PCFPDMBM_4	71862	73289	glgA	0.0	glycogen synthase	91.81	99.79	AAL22395
PCFPDMBM_7	72290	75337	fdoG	0.0	formate dehydrogenase-O major subunit	91.44	100.00	AAB03027
PCFPDMBM_1	561775	558731	fdnG	0.0	formate dehydrogenase, nitrate-inducible, major subunit	91.33	100.00	AAD13438
PCFPDMBM_38	17630	16737	nhaR	0.0	transcriptional activator protein	91.28	99.00	CAA27969
PCFPDMBM_34	239696	238266	norV	0.0	anaerobic nitric oxide reductase flavorubredoxin	90.98	99.37	KAE9675871
PCFPDMBM_34	155701	156951	amiC	0.0	N-acetylmuramoyl-L-alanine amidase	90.89	100.00	AAC75856
PCFPDMBM_35	127289	128428	gltS	0.0	regulatory protein	90.79	94.76	BAA00517
PCFPDMBM_1	583973	585514	narY	0.0	respiratory nitrate reductase 2 beta chain	90.66	100.00	AAC74549
PCFPDMBM_4	130698	131909	ArgD	0.0	acetylornithine/succinyldiaminopimelate aminotransferase	90.59	99.75	ACH49836
PCFPDMBM_23	93414	94598	trpB	0.0	tryptophan synthase beta chain	90.38	99.75	CBA20869
PCFPDMBM_7	47076	46117	pfkA	0.0	ATP-dependent 6-phosphofructokinase	90.31	100.00	CBA19050
PCFPDMBM_1	290182	291570	fumC	0.0	fumarate hydratase class II	90.28	99.14	AAL20389
PCFPDMBM_34	269241	268042	proV	0.0	glycine betaine/L-proline transport ATP-binding protein	90.25	100.00	AIS99989
PCFPDMBM_3	128558	131674	yegN	0.0	multidrug efflux system subunit	90.09	99.90	CDN82752
PCFPDMBM_23	289868	287823	Prc	0.0	tail-specific protease	90.03	100.00	BAA00577
PCFPDMBM_12	414216	412360	htpG	0.0	heat shock protein 90 chaperone	89.82	99.20	AAA23460
PCFPDMBM_37	5739	4615	efeO	0.0	iron uptake system component	89.60	100.00	AAC74103
PCFPDMBM_7	93725	91908	bipA	0.0	putative GTPase	89.60	99.84	CAL18716
PCFPDMBM_8	37901	36492	sufI	0.0	cell division protein	89.57	100.00	ABV16661
PCFPDMBM_35	166307	165027	envC	0.0	determinants for intrinsic CAMP resistance	89.46	100.00	ALE64165
PCFPDMBM_36	73610	75940	ArcB	0.0	two-component system	89.45	99.87	CAA37397
PCFPDMBM_1	580236	583973	narZ	0.0	respiratory nitrate reductase 2 alpha chain	89.08	100.00	AAC74550
PCFPDMBM_9	49058	50005	corA	0.0	magnesium/nickel/cobalt transporter	88.92	100.00	HM852064
PCFPDMBM_33	235443	236957	purF	0.0	amidophosphoribosyltransferase	88.91	100.00	CBA21663
PCFPDMBM_12	116513	115527	moaA	0.0	GTP 3',8-cyclase	88.75	100.00	AAC73868
PCFPDMBM_1	288389	290032	fumB	0.0	fumarate hydratase class I	88.69	100.00	AAL23124
PCFPDMBM_1	281257	279668	pafP	0.0	transcription regulator	88.49	100.00	AAA24098
PCFPDMBM_12	144801	145946	galK	0.0	galactokinase	88.48	100.00	CAA26172
PCFPDMBM_37	136698	135418	aroA	0.0	pathogenicity island	88.29	100.00	AAA27028
PCFPDMBM_33	6520	3881	pat	0.0	phosphate acetyltransferase	88.18	99.32	CAD5309993
PCFPDMBM_4	77409	75904	glpD	0.0	regulatory protein	87.85	100.00	AAA24636
PCFPDMBM_8	55982	57361	tolC	0.0	tolerant colicin	87.83	92.93	ACN32294
PCFPDMBM_8	55982	57361	MdsABC	0.0	multidrug transporter of Salmonella	87.61	93.48	TOLC_SALEN
PCFPDMBM_33	40574	41824	glyA	0.0	serine hydroxymethyltransferase	87.53	100.00	ACR70340
PCFPDMBM_7	25412	24258	metB	0.0	cystathionine gamma-synthase	87.53	99.74	CBA19080
PCFPDMBM_12	207531	209189	asnB	0.0	asparagine synthase B	87.18	99.82	CBA20089
PCFPDMBM_7	21609	20722	metF	0.0	methylenetetrahydrofolate reductase	87.16	98.34	CBA19083
PCFPDMBM_5	64777	62837	cpdB	0.0	2′,3′-cyclic phosphodiesterase	87.02	100.00	AAA97109
PCFPDMBM_37	83886	84938	OmpA2	0.0	outer membrane proteins	86.89	100.00	ACI08342
PCFPDMBM_34	13130	15262	speC	0.0	constitutive ornithine decarboxylase	86.78	100.00	AAC76002
PCFPDMBM_7	20574	18409	katG	0.0	catalase	86.76	99.72	AAL22946
PCFPDMBM_23	306312	307487	purT	0.0	formate-dependent phosphoribosylglycinamide formyltransferase	86.73	100.00	AAA23861
PCFPDMBM_1	669031	667382	mdoD	0.0	glucans biosynthesis protein D	86.73	99.82	AAC74506
PCFPDMBM_34	383501	386071	clpB	0.0	chaperone protein	86.70	100.00	ACT14164
PCFPDMBM_23	175523	174132	narK	0.0	nitrate/nitrite transporter	86.42	99.78	ACY88597
PCFPDMBM_34	239886	241394	STM14_RS15235	0.0	anaerobic nitric oxide reductase flavorubredoxin	86.19	99.80	ACY89844
PCFPDMBM_1	211360	209972	pykF	0.0	part of the pyruvate-tricarboxylic acid cycle node	86.18	98.30	CAH21544
PCFPDMBM_1	578778	580157	narU	0.0	nitrate/nitrite transporter	86.09	99.57	ACY88374
PCFPDMBM_36	34649	36091	tldD	0.0	regulatory factor	86.07	100.00	CBX73001
PCFPDMBM_23	162353	161343	hnr	0.0	regulators of systemic infection	86.05	100.00	Q7CQF1_SALTY
PCFPDMBM_3	136173	137570	baeS	0.0	histidine kinase	86.05	99.79	BAA03140
PCFPDMBM_34	182463	179698	barA	0.0		86.01	100.33	AAO70423
PCFPDMBM_38	81679	80018	tsr	0.0	methyl-accepting chemotaxis protein	85.92	100.00	ACY91777
PCFPDMBM_5	11289	9649	frdA	0.0	fumarate reductase	85.74	91.32	ACR67633
PCFPDMBM_33	30568	34452	purL	0.0	phosphoribosylformylglycinamidine synthase	85.48	100.00	CBA22070
PCFPDMBM_23	162353	161343	rssB	0.0	regulator protein	85.46	100.00	CAA46802
PCFPDMBM_9	8525	10066	ilvA	0.0	threonine dehydratase	85.41	100.00	CBA19104
PCFPDMBM_36	22590	21595	msrP	0.0	periplasmic methionine sulfoxide reductase	85.24	99.40	AAL22246
PCFPDMBM_35	30411	32237	glmS	0.0	glucosamine-fructose-6-phosphateaminotransferase	85.22	100.00	CBA24212
PCFPDMBM_33	154458	152734	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	85.22	100.00	CBA21827
PCFPDMBM_12	505082	503793	phoR	0.0	histidine kinase	85.12	99.77	AAL19352
PCFPDMBM_33	40269	39082	hmpA	0.0	nitric oxide dioxygenase	85.10	100.00	ACY89566
PCFPDMBM_7	89651	91057	yihO	0.0	O-antigen capsule	85.08	98.94	AF220438_7
PCFPDMBM_38	7099	5936	carA	0.0	carbamoyl-phosphate synthase small chain	85.05	99.23	CBA22700
PCFPDMBM_9	59616	61874	metE	0.0	5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase	84.75	99.47	CBA19150
PCFPDMBM_33	305335	308178	rcsC11	0.0	sensor protein	84.70	100.00	AAL21172
PCFPDMBM_36	81034	79604	rpoN	0.0	sigma factor, regulating essential virulence gene expression	84.49	100.00	CBA19258
PCFPDMBM_33	35033	36442	qseE	0.0	two-component regulatory system protein	84.25	98.74	EBV8836849
PCFPDMBM_1	150969	148714	katE	0.0	catalase	84.04	100.13	AAL20243
PCFPDMBM_12	110756	111994	clsB	0.0	cardiolipin synthase B	84.02	100.00	AAL19749
PCFPDMBM_23	385342	384203	flhB	0.0	flagellar biosynthetic protein	83.95	99.48	AAC74950
PCFPDMBM_2	10845	8494	LptD	0.0	LPS-assembly protein	83.84	99.87	BAA34130
PCFPDMBM_6	20623	22266	pgi	0.0	glucose-6-phosphate isomerase	83.58	100.00	CBA23505
PCFPDMBM_34	77488	78687	ubiI	0.0	aerobic ubiquinone-8 synthase	83.50	100.00	BAA14327
PCFPDMBM_12	353074	350474	VK055_1980	0.0	HADa ATPase, P type	83.41	98.63	AIK80586
PCFPDMBM_1	686406	684808	trg	0.0	methyl-accepting chemotaxis protein	83.11	98.52	ACY88437
PCFPDMBM_37	4607	3333	efeB	0.0	deferrochelatase/peroxidase	83.06	100.24	AAC74104
PCFPDMBM_34	199983	201695	cysI3	0.0	sulfite reductase	82.84	100.00	CBA19698
PCFPDMBM_7	12862	15510	ppc	0.0	phosphoenolpyruvate carboxylase	82.79	100.00	CBA19084
PCFPDMBM_34	238251	237121	norW	0.0	NO reductase	82.49	100.00	BAA05934
PCFPDMBM_23	64535	66517	rpfR	0.0	RpfFBc/RpfR system is involved in sensing and responding to DSF signals	82.45	96.64	CBA31265
PCFPDMBM_37	172184	170247	MacB	0.0	ABC-type efflux pump	82.44	99.85	AAL19878
PCFPDMBM_35	167864	166320	pgm	0.0	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	82.14	100.00	CAL18753
PCFPDMBM_12	458275	455924	LonA	0.0	protease regulates biofilm formation, motility, virulence, and the type VI secretion system	82.02	99.62	AAF95068
PCFPDMBM_23	400245	398221	cheA	0.0	chemotaxis protein	81.78	102.60	AAA23573
PCFPDMBM_1	648622	647210	ydcR	0.0	putative transcriptional regulator	81.74	99.37	ACY88406
PCFPDMBM_34	238251	237121	STM14_RS15245	0.0	carbamoyltransferase	81.17	100.00	ACY89846
PCFPDMBM_2	92253	93803	cueO	0.0	blue copper oxidase	81.04	100.00	AAC73234
PCFPDMBM_34	283991	285373	yahJ	0.0	putative deaminase with metallo-dependent hydrolase domain	80.91	100.00	AAC73427
PCFPDMBM_1	88071	86707	PhoPQ	0.0	virulence sensor histidine kinase	80.88	93.43	AAA27189
PCFPDMBM_1	88071	86707	phoQ	0.0	regulators of systemic infection	80.88	93.43	PHOQ_SALTY
PCFPDMBM_1	88071	86707	PhoQ	0.0	histidine kinase with a periplasmic sensor domain (PD) that promotes virulence by detecting the macrophage phagosome	80.88	93.43	ACY87894
PCFPDMBM_23	64559	66523	yciR	0.0	3'-phosphodiesterase	80.46	99.09	AAN80222
PCFPDMBM_37	83886	84938	ompA	2.36e-179	outer membrane protein A	82.53	100.57	ACY87707
PCFPDMBM_23	287624	286752	yebE	7.69e-179	cpx-regulated gene	92.44	99.32	CBG88624
PCFPDMBM_6	170	1096	metA	9.49e-179	homoserine O-succinyltransferase	84.47	100.00	CBA23513
PCFPDMBM_37	173218	172190	MacA	3.02e-178	ABC-type efflux pump	83.67	92.20	ADX1663
PCFPDMBM_7	7847	6933	SoxR	3.56e-178	activate gene expression in response to oxidative stress	91.47	100.00	EHT98951
PCFPDMBM_37	83886	84938	OmpA	8.74e-176	outer membrane protein A	83.66	101.15	AAN42586
PCFPDMBM_33	312439	313488	ompK36	2.18e-174	outer membrane protein	80.45	95.59	CAA83913
PCFPDMBM_2	27403	26489	yabL	1.05e-173	regulatory protein	88.20	93.27	AAA18833
PCFPDMBM_9	59498	58569	PccS1_001441	8.05e-172	transcriptional regulator, LysR family, MetR	83.87	99.68	ACT15089
PCFPDMBM_36	116293	117174	nlpI	9.51e-172	tetratricopeptide lipoprotein	86.73	100.00	EAM_3066
PCFPDMBM_12	217543	218448	gltI	8.34e-171	glutamate transporters	90.40	100.00	AAC73756
PCFPDMBM_34	319390	318524	katN	3.48e-170	catalase	88.58	98.97	CBW17757
PCFPDMBM_35	158679	157732	rfaC	5.19e-170	heptosyl transferase	81.45	99.37	AAL22571
PCFPDMBM_23	388544	387726	cheR	1.05e-169	chemotaxis protein methyltransferase	92.31	94.79	AAL20834
PCFPDMBM_34	242362	241400	STM14_RS15230	7.46e-169	NorR family transcriptional regulator	86.92	100.00	ACY89843
PCFPDMBM_9	59498	58575	metR	3.12e-168	HTH-type transcriptional regulator	84.09	98.72	CBA19149
PCFPDMBM_2	90786	89995	speD	1.75e-165	S-adenosylmethionine decarboxylase proenzyme	92.80	100.00	AAC73231
PCFPDMBM_23	401179	400307	motB	2.46e-165	motility protein	87.97	94.16	AAA24178
PCFPDMBM_2	134785	133997	map	6.02e-165	effector protein	92.02	99.62	CBG86951
PCFPDMBM_35	19589	20401	atpB	2.81e-163	F0F1 ATP synthase subunit A	91.51	100.00	ACY91043
PCFPDMBM_33	143579	142707	amiA	1.17e-162	N-acetylmuramoyl-L-alanine amidase	90.38	100.00	AAC75488
PCFPDMBM_1	307921	307172	FNR	2.08e-161	global regulator	97.20	100.00	AAA87981
PCFPDMBM_36	169422	170360	lsrB	1.22e-159	autoinducer-2 ABC transporter periplasmic binding protein	84.98	92.06	AAC74589
PCFPDMBM_23	402012	401182	motA	9.65e-159	motility protein	92.42	93.90	AAA24177
PCFPDMBM_23	67401	66538	rpfF	1.79e-158	RpfFBc/RpfR system is involved in sensing and responding to DSF signals	82.64	99.65	CBA31267
PCFPDMBM_12	270193	269345	entB	5.84e-158	enterobactin and salmochelin	86.22	99.65	ANN51031
PCFPDMBM_35	36417	37139	phoU	1.63e-157	phosphate-specific transport system accessory protein PhoU	98.34	100.00	QPQ67540
PCFPDMBM_4	98000	98716	ompR	3.85e-156	transcriptional regulator	100.00	100.00	AAC76430
PCFPDMBM_34	243128	242358	STM14_RS15225	8.72e-156	arabinose 5-phosphate isomerase	89.11	100.00	ACY89842
PCFPDMBM_33	256921	257856	LrhA	5.41e-155	probable HTH-type transcriptional regulator	84.94	100.00	CAA52637
PCFPDMBM_36	44216	45091	mdh	7.35e-155	malate dehydrogenase	81.51	93.59	ACR67684
PCFPDMBM_23	318073	317132	znuA	2.31e-154	Zn(2(+)) ABC transporter periplasmic binding	81.85	100.97	AAC74927
PCFPDMBM_4	122484	121672	NirC	7.41e-154	nitrite transporter	88.93	100.75	CAA32418
PCFPDMBM_38	35684	36397	arcA	1.41e-153	aerobic respiration control protein	97.06	100.00	AAA97297
PCFPDMBM_33	368018	368881	yeiE	2.15e-153	putative LysR family transcriptional regulator	86.46	100.00	AAL21105
PCFPDMBM_12	170911	170198	sdhB	2.51e-153	succinate dehydrogenase iron-sulfur subunit	94.96	100.00	AAA23896
PCFPDMBM_12	273176	274129	fepB	8.11e-153	regulatory protein	82.08	100.00	AAA83853
PCFPDMBM_1	204622	205365	sufC	1.25e-151	sulfur mobilization	93.14	100.00	APF09033
PCFPDMBM_7	81997	81224	yihW	6.96e-149	O-antigen capsule	86.43	96.63	AF220439_2
PCFPDMBM_23	285144	284356	kdgR	1.04e-148	virulence negative regulators	88.59	100.00	ERO57666
PCFPDMBM_23	318151	318903	znuC	2.46e-148	Zn(2(+)) ABC transporter ATP binding subunit	91.23	100.00	AAC74928
PCFPDMBM_2	6168	5353	rsmA	2.71e-147	ribosomal RNA small subunit methyltransferase A	80.88	100.00	ACT14650
PCFPDMBM_12	505793	505107	phoB	4.45e-146	transcriptional regulator	95.63	100.00	AAL19351
PCFPDMBM_23	254081	253365	gntR	1.79e-141	fatty acid metabolism regulator	88.70	100.00	ABR77737
PCFPDMBM_34	109972	110730	kduD	1.86e-141	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase	82.61	100.00	QHP58461
PCFPDMBM_12	316974	317843	STM14_RS15315	8.06e-140	hydrogenase assembly chaperone	82.41	100.00	ACY89865
PCFPDMBM_4	134775	134146	crp	1.63e-139	regulators of systemic infection	100.00	100.00	CRP_SALTY
PCFPDMBM_4	134775	134146	CRP	1.63e-139	cAMP receptor protein	100.00	100.00	AIT00739
PCFPDMBM_12	2920	3645	artP	5.72e-139	arginine ABC transporter, ATP-binding protein	94.22	100.00	CBG87650
PCFPDMBM_4	134775	134146	Crp	1.55e-138	transcriptional regulator	99.05	100.00	AE014000_4
PCFPDMBM_9	70835	71557	tatC	1.83e-137	Sec-independent protein translocase	90.87	93.05	AAL22819
PCFPDMBM_33	308943	308296	rcsB	5.82e-137	RcsA and RcsB form a complex to promote transcription of the genes for capsule synthesis.	99.07	100.00	ACQ91082
PCFPDMBM_12	460485	459865	ClpP	1.20e-136	proteolytic component	99.03	100.00	BAA94668
PCFPDMBM_23	437388	436735	sirA	1.52e-136		94.50	100.00	AAO68606
PCFPDMBM_1	77790	78530	cob	1.55e-136	nicotinamide adenine dinucleotide (NAD + )-dependent deacetylase	87.85	90.48	AAC78722
PCFPDMBM_12	276595	277584	fepG	3.22e-135	regulatory protein	82.12	100.00	CAA40708
PCFPDMBM_7	48962	49657	cpxR	1.89e-134	two-component response regulator	95.69	100.00	CBG90542
PCFPDMBM_7	48962	49657	CpxR	3.15e-134	response regulator (CpxR)-sensor kinase	95.69	100.00	AAC36868
PCFPDMBM_12	310213	309467	STM14_RS15275	2.90e-133	formate hydrogenlyase complex iron-sulfur subunit	86.34	97.65	ACY89855
PCFPDMBM_1	301286	300405	sssB	5.08e-133	secreted effector protein	80.27	93.31	ACY88258
PCFPDMBM_6	29686	30645	malM	9.45e-131	regulatory protein	80.94	104.25	AAB59059
PCFPDMBM_1	88839	88168	phoP	2.85e-130	virulence transcriptional regulatory protein	94.20	100.00	AEF07105
PCFPDMBM_1	88839	88168	PhoP	2.85e-130	part of the two-component system PhoP-PhoQ that regulates virulence	94.20	100.00	ACY87895
PCFPDMBM_35	140884	141522	pyrE	4.62e-130	orotate phosphoribosyltransferase	93.43	100.00	AAL22592
PCFPDMBM_2	76464	77156	pdhR	3.21e-128	part of the pyruvate-tricarboxylic acid cycle node	86.15	90.94	CAH19952
PCFPDMBM_12	493916	494515	tsaA	1.10e-125	peroxiredoxin	94.00	100.00	CBW16497
PCFPDMBM_23	167768	167097	narI	1.64e-125	respiratory nitrate reductase 1 gamma chain	87.50	99.56	AAC74311
PCFPDMBM_7	52427	51810	sodA	8.05e-125	cytoplasmic superoxide dismutase	96.60	100.00	AAC43331
PCFPDMBM_2	31477	30878	leuD	1.80e-123	3-isopropylmalate dehydratase small subunit	93.00	99.50	AIT01850
PCFPDMBM_36	149118	148459	dedA	8.23e-123	DedA family inner membrane protein	91.82	100.00	ARA47408
PCFPDMBM_34	212200	212823	pimt	2.52e-122	protein isoaspartate methyl transferase	90.39	100.00	AAL21806
PCFPDMBM_4	151788	152534	FkpA	1.86e-121	virulence factor	86.85	90.58	CCK16247
PCFPDMBM_33	14794	15366	rpoE	2.37e-121	regulators of systemic infection	97.91	100.00	RPOE_SALT
PCFPDMBM_23	168478	167774	narJ	2.69e-121	nitrate reductase molybdenum cofactor assembly chaperone	83.83	99.58	AAC74310
PCFPDMBM_12	249257	248697	ahpC	2.21e-119	peroxiredoxin	94.65	100.00	AAL19559
PCFPDMBM_12	313413	312529	STM14_RS15290	4.20e-119	formate hydrogenlyase subunit 3	83.73	96.09	ACY89858
PCFPDMBM_8	41740	42393	QseB	7.93e-119	two-component system response regulator	83.94	99.54	CAD03009
PCFPDMBM_23	308236	307601	eda	2.35e-118	2-keto-3-deoxy-6-phosphogluconate aldolase	86.32	99.53	CAG75378
PCFPDMBM_12	269336	268593	entA	6.11e-118	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	84.27	98.80	AAO69872
PCFPDMBM_5	5227	5790	EF-P	1.61e-117	elongation factor	93.08	100.00	AAL23157
PCFPDMBM_23	53624	52959	pspA	1.89e-117	phage-shock protein	93.24	100.00	ACY88508
PCFPDMBM_23	318903	319685	znuB	5.12e-116	Zn(2(+)) ABC transporter membrane subunit	93.49	100.00	AAC74929
PCFPDMBM_1	246638	246060	sodB	1.01e-115	cytoplasmic superoxide dismutase	91.19	100.00	AAL20353
PCFPDMBM_33	63512	64231	sseB	2.56e-115	secreted effector protein	87.08	91.95	ACY89541
PCFPDMBM_1	586209	586886	narV	2.08e-114	respiratory nitrate reductase 2 gamma chain	86.28	100.00	BAA15102
PCFPDMBM_3	120376	119798	magA	2.83e-113	contributes to K1 capsular polysaccharide (CPS) biosynthesis	90.67	100.00	BAD86762
PCFPDMBM_23	177622	178269	narL	7.44e-113	two-component system	95.37	100.00	CAA31742
PCFPDMBM_3	23592	24212	rcsA	7.81e-113	positive regulator of capsular polysaccharide synthesis. RcsA and RcsB form a complex to promote transcription of the genes for capsule synthesis.	83.09	100.00	AAL20894
PCFPDMBM_33	108065	107433	purN	3.58e-112	phosphoribosylglycinamide formyltransferase	83.41	99.53	AAA83899
PCFPDMBM_33	14794	15363	RpoE	3.47e-109	RNA polymerase sigma-E factor	87.37	98.96	CAR43933
PCFPDMBM_12	556432	557103	yagT	9.57e-108	aldehyde dehydrogenase iron-sulfur subunit	80.36	97.82	AIZ85831
PCFPDMBM_34	264341	263817	MprA	3.24e-106	transcriptional repressor of an operon encoding the EmrAB efflux pump.	93.14	99.43	CAA38090
PCFPDMBM_34	257053	257565	LuxS	1.39e-104	controller in the quorum sensing	91.23	100.00	ABJ02122
PCFPDMBM_12	382187	382678	ppiB	1.42e-103	peptidyl-prolyl cis-trans isomerase	96.34	100.00	ALD83591
PCFPDMBM_4	128576	129145	ppiA	2.01e-102	peptidyl-prolyl cis-trans isomerase	94.74	100.00	ALD83590
PCFPDMBM_37	113548	113003	ycbK	2.25e-102	peptidoglycan LD-endopeptidase	92.31	100.00	AAC74012
PCFPDMBM_23	386260	385670	cheZ	1.12e-101	protein phosphatase/ chemotactic response protein	90.86	92.06	AAL20831
PCFPDMBM_37	159452	158961	lrp	1.33e-101	global transcription factor	96.95	100.00	CBJ89611
PCFPDMBM_12	315850	315257	STM14_RS15300	3.06e-101	formate hydrogenlyase regulator	84.85	98.02	ACY89860
PCFPDMBM_38	22474	23040	satP	8.71e-100	succinate-acetate/proton symporter	86.77	100.00	AAC73121
PCFPDMBM_12	310755	310216	STM14_RS15280	1.53e-99	formate hydrogenlyase subunit 5	82.78	100.00	ACY89856
PCFPDMBM_33	349757	349191	MepS	4.13e-99	peptidoglycan DD-endopeptidase/peptidoglycan LD-carboxypeptidase	88.36	100.00	AAC75236
PCFPDMBM_12	297611	297069	STM14_RS15255	1.57e-95	hypothetical protein	80.66	100.00	ACY89850
PCFPDMBM_34	257053	257565	luxS	3.43e-95	regulatory factor	84.80	100.00	CBX73839
PCFPDMBM_34	360494	360015	smpB	9.46e-95	regulators of systemic infection	90.62	100.00	SSRP_SALTY
PCFPDMBM_8	57590	58222	ygiB	4.77e-94	cpx-regulated gene	85.38	94.17	CBG90293
PCFPDMBM_36	43751	43287	argR	1.39e-93	arginine repressor	95.48	99.36	CBG91281
PCFPDMBM_23	268603	269178	yeaB	2.59e-93	RNA methyltransferase	83.33	100.00	CBW17849
PCFPDMBM_4	97773	97303	greB	8.69e-92	transcription elongation factor	91.72	100.00	AAL22365
PCFPDMBM_12	196244	196687	Fur	1.27e-90	global ferric uptake regulator	95.95	100.00	CAA26429
PCFPDMBM_12	196244	196681	fur	1.71e-90	ferric uptake regulation protein	97.26	97.33	AAL19637
PCFPDMBM_23	19257	18769	hcp-2	1.36e-89	T6SS effector protein	82.82	100.00	CBA23273
PCFPDMBM_33	56447	56935	iscR	9.48e-86	Fe-S cluster sensor	96.34	99.39	AAL21438
PCFPDMBM_2	107015	106563	DksA	4.82e-85	response regulator	99.34	100.00	AAD01437
PCFPDMBM_23	398196	397696	cheW	2.49e-84	chemotaxis protein	93.41	100.00	AAA23565
PCFPDMBM_36	79205	78744	ptsN	3.15e-83	part of the pyruvate-tricarboxylic acid cycle node	85.71	96.25	CAH22766
PCFPDMBM_36	98540	99013	greA	5.45e-83	transcription elongation factor	91.77	100.00	AAL22169
PCFPDMBM_33	58293	58676	iscU	8.34e-78	Fe-S cluster sensor	97.66	100.00	APQ81541
PCFPDMBM_1	454746	454369	MarA	8.70e-78	transcriptional regulator	96.83	99.21	AAX65443
PCFPDMBM_1	26710	27123	flgB	1.56e-75	flagellin	86.23	100.00	BAA02861
PCFPDMBM_1	258206	258637	slyA	3.75e-75	regulators of systemic infection	86.81	100.00	SLYA_SALTY
PCFPDMBM_12	80683	80168	OmpX	2.45e-72	outer membrane protein	80.35	100.00	AAA66329
PCFPDMBM_3	17479	17919	filj	2.78e-72	flagellar protein	81.63	100.00	AAA27102
PCFPDMBM_12	428298	428657	tomB	2.37e-71	Hha toxicity attenuator	92.50	96.77	AKH06147
PCFPDMBM_12	173423	173037	sdhC	4.35e-70	succinate dehydrogenase	89.92	100.00	AAA23893
PCFPDMBM_12	309449	309042	STM14_RS15270	1.40e-68	NADH-quinone oxidoreductase subunit	80.15	100.00	ACY89854
PCFPDMBM_9	70305	70751	tatB	8.74e-68	Sec-independent protein translocase protein	85.91	81.32	CNR43407
PCFPDMBM_12	268589	268179	ybdB	1.97e-67	proofreading thioesterase	88.32	100.00	AE005239_7
PCFPDMBM_23	386660	386274	cheY	2.19e-64	chemotaxis regulator protein	93.80	100.00	AAL20832
PCFPDMBM_7	25691	26005	metJ	4.51e-63	repressor of the methionine biosynthesis regulon	94.29	100.00	CAG77150
PCFPDMBM_12	214153	214617	ybeY	3.22e-61	endoribonuclease	83.23	98.73	CAL13026
PCFPDMBM_34	223842	224183	STM14_RS15340	5.76e-60	iron ABC transporter substrate-binding protein	85.97	100.00	ACY89870
PCFPDMBM_36	13583	13290	PccS1_001523	5.85e-57	transcriptional regulator, Fis family, Fis	97.96	100.00	ACT11296
PCFPDMBM_1	317364	317723	mdtJ	3.49e-56	multidrug transporter subunit	82.50	100.00	AUY17561
PCFPDMBM_37	132642	132361	himD	4.40e-56	regulators of systemic infection	97.87	100.00	IHFB_SALTY
PCFPDMBM_1	167461	167748	ihfA	5.33e-56	integration host factor	100.00	96.97	ACI10637
PCFPDMBM_37	132642	132364	ihfB	7.53e-56	integration host factor	98.92	97.89	ACI06745
PCFPDMBM_34	380523	380188	yfiA	1.22e-55		82.14	100.00	CBA19780
PCFPDMBM_23	403117	402806	flhDC	6.98e-55	regulatory protein	87.50	92.04	AAB96639
PCFPDMBM_12	354228	353899	ramA	1.55e-53	transcriptional regulator	87.27	97.35	AAX64518
PCFPDMBM_1	317713	318033	mdtI	1.62e-53	multidrug resistance protein	87.85	98.17	ACI10803
PCFPDMBM_9	13032	12754	ppiC	4.48e-52	peptidyl-prolyl cis-trans isomerase	93.55	100.00	ALD83589
PCFPDMBM_12	173040	172759	sdhD	7.22e-48	succinate dehydrogenase	89.36	81.74	AAA23894
PCFPDMBM_36	79578	79294	yhbH	5.01e-47	a novel ribosome-associated modulation protein	83.16	100.00	CBA19257
PCFPDMBM_8	62335	62619	yqiC	1.78e-46	membrane fusogenic activity	85.26	95.96	CNQ39570
PCFPDMBM_33	154760	154506	ptsH	8.36e-46	phosphocarrier protein HPr	95.29	100.00	CBA21825
PCFPDMBM_14	4095	3850	hupA	2.52e-45	nucleoid-associated protein, is a basic DNA-binding protein involved in gene regulation	96.34	91.11	ACY83030
PCFPDMBM_23	96777	97007	yedF	4.83e-43	hypothetical transcription factor	97.40	100.00	AAL20878
PCFPDMBM_5	27119	27424	hfq	8.10e-41	regulators of systemic infection	87.25	100.00	HFQ_SALTY
PCFPDMBM_23	159613	160023	hns	1.70e-40	global DNA-binding transcriptional dual regulator	91.97	100.00	CAA30530
PCFPDMBM_12	428699	428914	hha	1.88e-39	hemolysin expression-modulating protein	94.44	100.00	AAL19427
PCFPDMBM_23	52904	52683	pspB	3.02e-38	phage-shock protein	89.19	100.00	ACY88507
PCFPDMBM_12	317837	318106	STM14_RS15320	4.62e-38	hydrogenase formation protein	80.00	98.89	ACY89866
PCFPDMBM_23	281700	281494	cspC	3.19e-37	cold shock protein	100.00	100.00	AAC06037
PCFPDMBM_12	239638	239432	cspE	9.47e-37	cold shock protein	97.10	100.00	ACY87244
PCFPDMBM_1	258242	258439	eha	1.85e-32	hemolysin activator protein	90.91	100.00	AFS33086
PCFPDMBM_12	428714	428914	ymoA	4.23e-30	modulator	82.09	100.00	CAA41091
PCFPDMBM_1	67241	67495	ycfR	5.01e-30	outer membrane protein	89.41	100.00	AAL20143
PCFPDMBM_34	253076	253240	csrA	2.93e-27	post-transcriptional regulator	100.00	90.16	AAA71919
PCFPDMBM_34	253076	253240	RsmA	1.92e-26	carbon storage regulator homolog	98.18	90.16	AAA74502
PCFPDMBM_34	253076	253240	CsrA	4.81e-26	small RNA-binding protein involved in the regulation of a wide range of cellular processes.	98.18	84.62	AAF93716
PCFPDMBM_34	253076	253231	rsmAXoo	1.35e-22	RNA-binding protein	90.39	74.29	HM988729
PCFPDMBM_9	70047	70298	tatA	1.37e-19	Sec-independent protein translocase protein	83.33	100.00	CNR43436
PCFPDMBM_37	22684	22556	SEN1538	1.42e-16	conserved hypothetical protein	90.70	71.67	CAR33117
PCFPDMBM_37	22684	22556	PA2146	3.59e-14	conserved hypothetical protein	83.72	78.18	AE004642_1
PCFPDMBM_5	27125	27322	hfq1 (bglu_1g14550)	8.72e-32	RNA-binding protein Hfq	86.36	78.57	ACR28603
PCFPDMBM_12	354728	354411	RomA (VK055_1984)	5.66e-52	metallo-beta-lactamase superfamily protein	81.13	80.30	AIK80590
PCFPDMBM_35	39353	40648	EaAdeP (EAMY 3685)	0.0	putative AzgA family transporter	84.95	98.86	CBA24187
PCFPDMBM_33	20676	21302	RNase III	3.58e-134	endoribonucleases	97.61	92.48	AAA92440
PCFPDMBM_2	127169	128485	degP (ROD_01651)	0.0	periplasmic serine endoprotease DegP-like	92.25	92.99	CBG86945
PCFPDMBM_12	271797	270241	entE (VK055_1924)	0.0	(2,3-dihydroxybenzoyl)adenylate synthase	81.64	97.57	AIK80530
PCFPDMBM_12	275482	274265	entS (VK055_1927)	4.03e-175	enterobactin exporter	85.96	97.60	AIK80533
PCFPDMBM_33	308943	308314	RcsB (YE1397)	3.88e-124	transcriptional regulatory protein	91.91	97.67	CAL11489
PCFPDMBM_12	275594	276580	FepD (VK055_1928)	2.80e-115	ferric enterobactin transport system permease	85.41	98.21	AIK80534
PCFPDMBM_1	211360	209972	STM14_RS07745 (pykF)	0.0	pyruvate kinase I	97.19	98.30	ACY88150
PCFPDMBM_1	209658	209425	STM14_RS07735 (lppB)	3.61e-33	hypothetical protein	84.81	98.73	ACY88148
PCFPDMBM_33	267240	267782	nuoI (PA2644)	1.07e-94	NADH-quinone oxidoreductase	81.77	99.45	AE004693_3
PCFPDMBM_12	269369	268593	EntA (VK055_1922)	2.98e-129	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	86.59	99.62	AIK80528
PCFPDMBM_34	245783	244827	STM14_RS15200 (srlE)	9.78e-175	PTS sorbitol transporter subunit IIB	90.71	99.69	ACY89837
PCFPDMBM_37	169183	166913	clpA (Dda3937_02363)	0.0	ATP-dependent Clp protease ATP-binding subunit	90.75	99.74	ADM98239
PCFPDMBM_1	209658	209425	STM14_RS07740 (lpp)	1.23e-41	murein lipoprotein	100.00	100.00	ACY88149
PCFPDMBM_9	18442	18768	thioredoxin 1	8.14e-66	redox activity	99.08	100.00	BAA00903
PCFPDMBM_34	246343	245783	STM14_RS15195 (srlA)	2.29e-97	PTS sorbitol transporter subunit IIC	94.65	100.00	ACY89836
PCFPDMBM_1	204622	205365	STM14_RS07710 (sufC)	1.25e-151	Fe-S cluster assembly ATPase	93.14	100.00	ACY88143
PCFPDMBM_34	244434	243658	STM14_RS15210 (srlD)	4.68e-156	sorbitol-6-phosphate dehydrogenase	92.66	100.00	ACY89839
PCFPDMBM_7	106855	106235	dsbA (ROD_38991)	3.74e-124	thiol:disulfide interchange protein	88.89	100.00	CBG90603
PCFPDMBM_1	349494	350375	ovrB (Z0346)	1.04e-152	LysR-type transcriptional regulator	88.44	100.00	AE005205_3
PCFPDMBM_12	277584	278375	FepC (VK055_1930)	4.65e-141	ferric vibriobactin ABC transporter, ATP-binding protein	86.36	100.00	AIK80536
PCFPDMBM_1	206611	207828	STM14_RS07720 (sufS)	0.0	cysteine desulfurase	81.53	100.00	ACY88145
PCFPDMBM_23	402764	402189	flhC (Dda3937_02784)	1.56e-101	flagellar transcriptional activator	81.25	100.00	ADM99088
PCFPDMBM_12	276595	277584	FepG (VK055_1929)	6.91e-135	ferric enterobactin transport system permease	81.21	100.00	AIK80535
PCFPDMBM_1	207846	208259	STM14_RS07725 (ynhA/sufE)	1.51e-70	cysteine desulfuration protein	80.44	100.00	ACY88146
PCFPDMBM_12	286199	288436	FepA (VK055_1934)	0.0	TonB-dependent siderophore receptor family protein	81.41	100.67	AIK80540
PCFPDMBM_12	240197	239832	pagP	7.22e-60	conserved hypothetical protein	81.15	65.05	ABJ00040
PCFPDMBM_5	27119	27322	Hfq	2.00e-37	RNA-binding protein	98.53	67.33	CAL19055