Genome ID：GCA_000014485.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	35	29	45.45

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
HOMHAHLN_1	1126286	1127155	rfbA	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681286
HOMHAHLN_1	980328	981743	STER_RS05250	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681165
HOMHAHLN_1	982944	983924	STER_RS05260	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681166
HOMHAHLN_1	983917	985101	STER_RS05265	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681167
HOMHAHLN_1	985118	986170	STER_RS05270	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681168
HOMHAHLN_1	986185	987093	STER_RS05275	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681169
HOMHAHLN_1	987114	988175	STER_RS05280	0.0	Capsule	Immune modulation	100.00	100.00	WP_202964935
HOMHAHLN_1	988212	988703	STER_RS05285	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681171
HOMHAHLN_1	988715	989191	STER_RS05290	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681172
HOMHAHLN_1	989947	991314	STER_RS05300	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681173
HOMHAHLN_1	991371	992111	STER_RS05305	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681174
HOMHAHLN_1	992121	992813	STER_RS05310	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681175
HOMHAHLN_1	992822	993553	STER_RS05315	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681176
HOMHAHLN_1	993554	995014	STER_RS05320	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681177
HOMHAHLN_1	1125693	1126286	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
HOMHAHLN_1	1339353	1341098	STER_RS07045	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681434
HOMHAHLN_1	1341100	1342800	STER_RS07050	0.0	Capsule	Immune modulation	100.00	100.00	WP_041827753
HOMHAHLN_1	1342818	1344020	STER_RS07055	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681436
HOMHAHLN_1	1344020	1344826	STER_RS07060	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681437
HOMHAHLN_1	1344826	1345767	STER_RS07065	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681438
HOMHAHLN_1	1345764	1346912	STER_RS07070	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681439
HOMHAHLN_1	1347031	1347807	STER_RS07075	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681440
HOMHAHLN_1	1348153	1348869	STER_RS07085	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681442
HOMHAHLN_1	1348870	1349838	STER_RS07090	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681443
HOMHAHLN_1	1349856	1350833	STER_RS07095	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681444
HOMHAHLN_1	1350830	1352089	STER_RS07100	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681445
HOMHAHLN_1	1125693	1126286	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
HOMHAHLN_1	1341100	1342800	STR_RS06890	0.0	Capsule	Immune modulation	99.71	100.00	WP_041827077
HOMHAHLN_1	1125693	1126286	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
HOMHAHLN_1	887224	888882	fbp54	0.0	FBPs	Adherence	99.64	100.00	WP_011227179
HOMHAHLN_1	45089	45928	cbpD	0.0	Autolysin	Exoenzyme	99.52	100.00	WP_011226733
HOMHAHLN_1	1344020	1344826	STR_RS06900	0.0	Capsule	Immune modulation	99.50	100.00	WP_011227429
HOMHAHLN_1	1344826	1345767	STR_RS06905	0.0	Capsule	Immune modulation	99.47	100.00	WP_011227430
HOMHAHLN_1	1342818	1344020	STR_RS06895	0.0	Capsule	Immune modulation	99.42	100.00	WP_011227428
HOMHAHLN_1	1345764	1346912	STR_RS06910	0.0	Capsule	Immune modulation	99.22	100.00	WP_011227431
HOMHAHLN_1	1068145	1068935	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.74	100.00	-
HOMHAHLN_1	991376	992111	STR_RS05250	0.0	Capsule	Immune modulation	98.50	98.13	WP_011227246
HOMHAHLN_1	991371	992111	STU_RS14635	0.0	Capsule	Immune modulation	98.25	100.00	WP_011226046
HOMHAHLN_1	992822	993553	STR_RS05260	0.0	Capsule	Immune modulation	98.22	100.00	WP_011227248
HOMHAHLN_1	1339353	1341098	STR_RS06885	0.0	Capsule	Immune modulation	98.22	100.00	WP_011227426
HOMHAHLN_1	992822	993553	STU_RS14645	0.0	Capsule	Immune modulation	98.09	100.00	WP_011226048
HOMHAHLN_1	1161055	1161816	srtA	0.0	Sortase A	Exoenzyme	97.64	100.00	-
HOMHAHLN_1	993554	995014	STU_RS14650	0.0	Capsule	Immune modulation	97.47	100.21	WP_011226049
HOMHAHLN_1	993554	995014	STR_RS05265	0.0	Capsule	Immune modulation	96.92	100.21	WP_041827043
HOMHAHLN_1	1352208	1353059	rfbD	0.0	Capsule	Immune modulation	96.83	100.00	WP_014621820
HOMHAHLN_1	989951	991314	STU_RS14630	0.0	Capsule	Immune modulation	94.94	99.71	WP_011226045
HOMHAHLN_1	992121	992813	STU_RS14640	0.0	Capsule	Immune modulation	89.90	100.00	WP_011226047
HOMHAHLN_1	992121	992813	STR_RS05255	0.0	Capsule	Immune modulation	89.61	100.00	WP_011227247
HOMHAHLN_1	620012	621315	eno	0.0	Streptococcal enolase	Exoenzyme	88.10	99.46	WP_000022832
HOMHAHLN_1	1647043	1648053	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.54	99.41	WP_002986042
HOMHAHLN_1	1344020	1344826	SGO_RS05020	0.0	Capsule	Immune modulation	82.90	100.00	WP_012000440
HOMHAHLN_1	157096	158379	tig/ropA	0.0	Trigger factor	Stress survival	80.73	99.77	WP_000107753
HOMHAHLN_1	1124218	1125264	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423
HOMHAHLN_1	1343283	1344020	SGO_RS05025	0.0	Capsule	Immune modulation	84.96	60.29	WP_012000441

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
HOMHAHLN_1	1164503	1165486	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
HOMHAHLN_1	725315	726388	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
HOMHAHLN_1	1517883	1520186	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
HOMHAHLN_1	534956	535924	spr0084	0.0	pathogenitcity related	92.88	98.48	AAK98888
HOMHAHLN_1	1241258	1242739	SPD_0310	0.0	UPF0371 protein SPD_0310	92.51	100.00	ABJ54480
HOMHAHLN_1	757225	759471	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
HOMHAHLN_1	64720	65718	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
HOMHAHLN_1	28605	29576	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
HOMHAHLN_1	1401196	1400045	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
HOMHAHLN_1	1366098	1364110	uvrB	0.0	excinuclease ABC, B subunit	89.14	100.00	AE014259_2
HOMHAHLN_1	1148304	1146574	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	87.87	100.00	AAK34199
HOMHAHLN_1	1845391	1843913	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
HOMHAHLN_1	620012	621313	Eno	0.0	enolase	86.21	99.77	ABP90468
HOMHAHLN_1	1830656	1828764	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.74	98.90	ABP91129
HOMHAHLN_1	762396	760687	PGM	0.0	phosphoglucomutase	84.06	99.65	ACH87041
HOMHAHLN_1	1690036	1691046	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
HOMHAHLN_1	913317	911956	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
HOMHAHLN_1	1741769	1739877	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
HOMHAHLN_1	605576	606466	bglB	5.26e-178	putative phospho--glucosidase	88.55	99.66	AAK33487
HOMHAHLN_1	833678	832740	SP_0676	8.23e-168	transcription facot	81.47	97.20	AAK74821
HOMHAHLN_1	759663	760520	metF	1.53e-164	methionine biosynthesis enzymes	86.36	99.31	AAK74739
HOMHAHLN_1	1031836	1031132	covR	4.39e-131	responder protein	85.53	100.00	AAK71319
HOMHAHLN_1	1216652	1215981	rr01	3.01e-124	response regulator	83.93	99.56	CAB54566
HOMHAHLN_1	1031836	1031132	walR	1.85e-121	DNA-binding response regulator	82.13	100.00	ANC99504
HOMHAHLN_1	766351	767019	CiaR	2.02e-117	two-component response regulator	84.31	99.55	AAK74935
HOMHAHLN_1	310055	310741	CovR	5.07e-117	serves to repress GAS virulence factor-encoding genes	80.35	100.00	ACE75886
HOMHAHLN_1	766351	767022	ciaR	1.99e-115	two component system response regulator	82.14	99.12	AIK75708
HOMHAHLN_1	65994	66368	SpxA2	1.16e-69	transcriptional regulator	91.20	94.70	ERL21461
HOMHAHLN_1	924680	925081	SpxA1	3.77e-66	transcriptional regulator	80.60	100.00	ERL19273
HOMHAHLN_1	158537	159037	RopE (M5005_Spy_1611)	4.93e-75	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
HOMHAHLN_1	1517883	1520180	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
HOMHAHLN_1	1725897	1724878	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451