Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 0 | 1 | 7.07 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FIJEFOCF_3 | 1714696 | 1715901 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| FIJEFOCF_1 | 608767 | 610692 | tet(Q) | ARO:3000191 | tet(Q) | 97.04 | 97.56 | Z21523.1 |
| FIJEFOCF_3 | 245423 | 246184 | ErmB | ARO:3000375 | ErmB | 97.95 | 102.02 | AF242872.1 |
| FIJEFOCF_3 | 241407 | 242192 | APH(3')-IIIa | ARO:3002647 | APH(3')-IIIa | 100.00 | 98.86 | CP004067.1 |
| FIJEFOCF_10 | 800 | 1990 | tet(C) | ARO:3000167 | tet(C) | 100.00 | 100.00 | AY043299.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FIJEFOCF_3 | 248579 | 249445 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
| FIJEFOCF_1 | 608767 | 610692 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X58717 |
| FIJEFOCF_3 | 241403 | 242192 | aph(3')-III | Kanamycin, Amikacin, Neomycin, Butirosin, Isepamicin, Lividomycin, Paromomycin, Ribostamycin | 100.00 | 99.37 | M26832 |
| FIJEFOCF_10 | 800 | 1990 | tet(C) | Doxycycline, Tetracycline | 99.92 | 100.00 | AF055345 |
| FIJEFOCF_3 | 245456 | 246184 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 98.78 | U18931 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FIJEFOCF_3 | 248579 | 249442 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
| FIJEFOCF_3 | 1715926 | 1716435 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| FIJEFOCF_10 | 803 | 1990 | tet(C) | tetracycline efflux MFS transporter Tet(C) | EXACTX | 100.00 | 100.00 | WP_001297013.1 |
| FIJEFOCF_1 | 608767 | 610689 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
| FIJEFOCF_3 | 241404 | 242189 | aph(3')-IIIa | aminoglycoside O-phosphotransferase APH(3')-IIIa | BLASTX | 100.00 | 99.24 | WP_001096887.1 |
| FIJEFOCF_3 | 1714696 | 1715898 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| FIJEFOCF_3 | 245450 | 246181 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.18 | 99.59 | WP_002292226.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FIJEFOCF_5 | 173207 | 171627 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |