Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JDOFDCBI_82 | 3 | 866 | tet(C) | ARO:3000167 | tet(C) | 100.00 | 72.73 | AY043299.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JDOFDCBI_82 | 1 | 868 | tet(C) | Doxycycline, Tetracycline | 100.00 | 73.81 | AY046276 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JDOFDCBI_82 | 3 | 866 | tet(C) | tetracycline efflux MFS transporter Tet(C) | PARTIAL_CONTIG_ENDX | 100.00 | 73.66 | WP_000841448.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JDOFDCBI_95 | 177901 | 177707 | CspA | 1.15e-27 | cold shock protein | 84.61 | 98.48 | CAA62903 |