Genome ID:GCA_000260335.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3023.61

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OGLPIMID_32629327069ErmCARO:3000250ErmC95.04105.74M12730.1
OGLPIMID_373699288tet(M)ARO:3000186tet(M)98.90100.00AB039845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OGLPIMID_357987175tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.56100.00AY081910
OGLPIMID_373699288tet(M)Doxycycline, Tetracycline, Minocycline99.53100.00X75073
OGLPIMID_32633627069erm(C)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S99.0599.86Y09003

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OGLPIMID_373729288tet(M)tetracycline resistance ribosomal protection protein Tet(M)BLASTX99.37100.00WP_000691727.1
OGLPIMID_358687175tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.8595.20WP_002294500.1
OGLPIMID_32634127066erm(C)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)BLASTX98.3599.18WP_032492416.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OGLPIMID_96069561402WalR3.20e-116transcriptional regulatory protein85.59100.43EPH95667
OGLPIMID_8518265518462CspR1.52e-27cold shock protein81.82100.00AAO82613
OGLPIMID_8518265518459CspA7.41e-27cold shock protein81.5498.48CAA62903