Genome ID:GCA_000284675.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 22 | 19 | 29.07 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KNEBHBDB_39 | 5310 | 5903 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| KNEBHBDB_21 | 5063 | 5872 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | WP_002948020 |
| KNEBHBDB_39 | 5310 | 5903 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| KNEBHBDB_39 | 5310 | 5903 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| KNEBHBDB_21 | 2976 | 4124 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 99.65 | 100.00 | WP_041828290 |
| KNEBHBDB_21 | 4121 | 5079 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | WP_011226328 |
| KNEBHBDB_21 | 7098 | 8153 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 99.53 | 100.00 | WP_002948022 |
| KNEBHBDB_11 | 9559 | 11217 | fbp54 | 0.0 | FBPs | Adherence | 99.52 | 100.00 | WP_011227179 |
| KNEBHBDB_21 | 8150 | 9934 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 99.44 | 100.00 | WP_011226325 |
| KNEBHBDB_21 | 5872 | 7078 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011226326 |
| KNEBHBDB_39 | 5903 | 6772 | rfbA | 0.0 | Capsule | Immune modulation | 99.08 | 100.00 | WP_011681286 |
| KNEBHBDB_17 | 9075 | 9814 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.05 | 87.26 | WP_011226733 |
| KNEBHBDB_4 | 18550 | 19150 | STR_RS05245 | 0.0 | Capsule | Immune modulation | 99.00 | 100.00 | WP_196767671 |
| KNEBHBDB_174 | 590 | 1380 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.99 | 100.00 | - |
| KNEBHBDB_78 | 554 | 1410 | rfbD | 0.0 | Capsule | Immune modulation | 98.95 | 100.35 | WP_014621820 |
| KNEBHBDB_13 | 592 | 2007 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 98.80 | 99.93 | WP_011681165 |
| KNEBHBDB_4 | 21484 | 22938 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 98.76 | 100.00 | WP_011226049 |
| KNEBHBDB_4 | 21484 | 22938 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 98.62 | 100.00 | WP_041827043 |
| KNEBHBDB_4 | 17424 | 18383 | STR_RS05240 | 0.0 | Capsule | Immune modulation | 98.23 | 100.00 | WP_041827042 |
| KNEBHBDB_21 | 585 | 1860 | STU_RS16265 | 0.0 | Capsule | Immune modulation | 98.12 | 100.00 | WP_011226331 |
| KNEBHBDB_4 | 19302 | 20037 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 97.96 | 99.33 | WP_011681174 |
| KNEBHBDB_21 | 1860 | 2867 | STU_RS16260 | 0.0 | Capsule | Immune modulation | 97.83 | 99.70 | WP_011226330 |
| KNEBHBDB_4 | 19302 | 20037 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.83 | 99.33 | WP_011226046 |
| KNEBHBDB_4 | 19288 | 20037 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 97.47 | 100.00 | WP_011227246 |
| KNEBHBDB_4 | 21484 | 22938 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.06 | 99.79 | WP_011681177 |
| KNEBHBDB_4 | 20754 | 21483 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 96.86 | 99.59 | WP_011681176 |
| KNEBHBDB_4 | 20754 | 21483 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 96.45 | 99.59 | WP_011226048 |
| KNEBHBDB_4 | 20754 | 21483 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 96.04 | 99.59 | WP_011227248 |
| KNEBHBDB_4 | 20047 | 20728 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 93.25 | 98.41 | WP_011226047 |
| KNEBHBDB_4 | 20047 | 20728 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 92.96 | 98.41 | WP_011227247 |
| KNEBHBDB_4 | 20047 | 20728 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 85.92 | 98.41 | WP_011681175 |
| KNEBHBDB_39 | 3835 | 4881 | rfbB | 0.0 | Capsule | Immune modulation | 80.33 | 100.00 | WP_009659423 |
| KNEBHBDB_222 | 203 | 875 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 85.23 | 66.17 | WP_000260656 |
| KNEBHBDB_226 | 92 | 967 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.14 | 68.15 | WP_000107749 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KNEBHBDB_9 | 56 | 1129 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| KNEBHBDB_51 | 2228 | 4531 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 93.10 | 99.22 | AAK74619 |
| KNEBHBDB_15 | 4429 | 6675 | metE | 0.0 | methionine biosynthesis enzymes | 91.72 | 100.00 | AAK74738 |
| KNEBHBDB_29 | 13095 | 11821 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 89.65 | 86.21 | ADE32434 |
| KNEBHBDB_103 | 2719 | 3609 | bglB | 0.0 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| KNEBHBDB_71 | 453 | 2345 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.05 | 98.90 | ABP91129 |
| KNEBHBDB_45 | 379 | 1404 | mnmE | 0.0 | central tRNA-modifying GTPase | 83.63 | 74.84 | ABP90420 |
| KNEBHBDB_14 | 8287 | 6395 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| KNEBHBDB_251 | 6 | 869 | SP_0676 | 1.46e-170 | transcription facot | 81.25 | 89.13 | AAK74821 |
| KNEBHBDB_15 | 6867 | 7724 | metF | 1.27e-166 | methionine biosynthesis enzymes | 86.01 | 99.31 | AAK74739 |
| KNEBHBDB_89 | 124 | 906 | prsA2 | 1.09e-160 | ribose-phosphate pyrophosphokinase | 89.66 | 80.56 | ABF36968 |
| KNEBHBDB_50 | 8303 | 9013 | pdh | 2.02e-154 | pyruvate dehydrogenase | 83.12 | 70.12 | ABP91006 |
| KNEBHBDB_101 | 6083 | 6793 | spr0084 | 6.34e-137 | pathogenitcity related | 87.76 | 72.26 | AAK98888 |
| KNEBHBDB_122 | 1954 | 2625 | rr01 | 1.85e-131 | response regulator | 84.38 | 99.56 | CAB54566 |
| KNEBHBDB_15 | 13554 | 14222 | CiaR | 3.36e-122 | two-component response regulator | 85.65 | 99.55 | AAK74935 |
| KNEBHBDB_15 | 13554 | 14225 | ciaR | 4.78e-120 | two component system response regulator | 83.48 | 99.12 | AIK75708 |
| KNEBHBDB_168 | 1403 | 1777 | SpxA2 | 2.07e-75 | transcriptional regulator | 91.20 | 94.70 | ERL21461 |
| KNEBHBDB_37 | 7498 | 7211 | spr0479 | 7.07e-50 | essential gene | 86.46 | 98.97 | AAK99283 |
| KNEBHBDB_70 | 6794 | 6570 | spr0177 | 3.37e-26 | essential gene | 82.67 | 74.26 | AAK98981 |
| KNEBHBDB_136 | 2148 | 2978 | ilvC (SPD_0406) | 1.63e-172 | ketol-acid reductoisomerase (NADP(+)) | 94.22 | 81.47 | ABJ55451 |
| KNEBHBDB_51 | 2228 | 4525 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 83.07 | 98.08 | MYN69560 |
| KNEBHBDB_148 | 1211 | 1981 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.11 | 66.75 | AAL00050 |
| KNEBHBDB_15 | 9601 | 8471 | PGM | 0.0 | phosphoglucomutase | 84.08 | 65.91 | ACH87041 |