Genome ID：GCA_000286295.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	22	33	39.66

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PCLDDPFM_7	73589	74398	STU_RS16245	0.0	Capsule	Immune modulation	95.68	100.00	WP_002948020
PCLDDPFM_2	1015185	1016550	STER_RS05300	0.0	Capsule	Immune modulation	95.61	99.85	WP_011681173
PCLDDPFM_2	1015185	1016552	STU_RS14630	0.0	Capsule	Immune modulation	95.10	100.00	WP_011226045
PCLDDPFM_7	77744	78595	rfbD	0.0	Capsule	Immune modulation	94.48	100.00	WP_014621820
PCLDDPFM_2	1014388	1015128	STER_RS05305	0.0	Capsule	Immune modulation	94.20	100.00	WP_011681174
PCLDDPFM_2	1011485	1012945	STER_RS05320	0.0	Capsule	Immune modulation	93.98	100.00	WP_011681177
PCLDDPFM_2	1011485	1012945	STU_RS14650	0.0	Capsule	Immune modulation	93.84	100.14	WP_011226049
PCLDDPFM_2	1014388	1015128	STU_RS14635	0.0	Capsule	Immune modulation	93.66	100.00	WP_011226046
PCLDDPFM_2	1011485	1012945	STR_RS05265	0.0	Capsule	Immune modulation	93.22	100.14	WP_041827043
PCLDDPFM_2	1014388	1015123	STR_RS05250	0.0	Capsule	Immune modulation	93.21	98.13	WP_011227246
PCLDDPFM_7	69548	71332	STU_RS16230	0.0	Capsule	Immune modulation	92.94	100.00	WP_011226325
PCLDDPFM_2	1012946	1013677	STU_RS14645	0.0	Capsule	Immune modulation	92.35	100.00	WP_011226048
PCLDDPFM_7	72384	73589	STU_RS16240	0.0	Capsule	Immune modulation	92.21	100.00	WP_011226326
PCLDDPFM_2	844453	845046	STR_RS05880	0.0	Capsule	Immune modulation	91.92	100.00	WP_011226149
PCLDDPFM_7	75335	76483	STU_RS16255	0.0	Capsule	Immune modulation	91.91	100.00	WP_041828290
PCLDDPFM_2	844453	845046	STER_RS06030	0.0	Capsule	Immune modulation	91.75	100.00	WP_011226149
PCLDDPFM_2	844453	845046	STU_RS15260	0.0	Capsule	Immune modulation	91.75	100.00	WP_011226149
PCLDDPFM_2	1012946	1013677	STER_RS05315	0.0	Capsule	Immune modulation	91.67	100.00	WP_011681176
PCLDDPFM_7	71329	72363	STU_RS16235	0.0	Capsule	Immune modulation	91.67	99.05	WP_002948022
PCLDDPFM_7	74382	75338	STU_RS16250	0.0	Capsule	Immune modulation	91.64	100.00	WP_011226328
PCLDDPFM_2	843584	844453	rfbA	0.0	Capsule	Immune modulation	91.49	100.00	WP_011681286
PCLDDPFM_2	1012946	1013677	STR_RS05260	0.0	Capsule	Immune modulation	91.39	100.00	WP_011227248
PCLDDPFM_2	1133455	1135113	fbp54	0.0	FBPs	Adherence	91.08	99.94	WP_011227179
PCLDDPFM_2	1013686	1014378	STR_RS05255	0.0	Capsule	Immune modulation	88.91	99.86	WP_011227247
PCLDDPFM_2	1013686	1014378	STU_RS14640	0.0	Capsule	Immune modulation	88.91	99.86	WP_011226047
PCLDDPFM_7	416551	417561	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	88.65	99.80	WP_002986042
PCLDDPFM_2	658121	659424	eno	0.0	Streptococcal enolase	Exoenzyme	88.40	99.54	WP_000022832
PCLDDPFM_2	38630	39469	cbpD	0.0	Autolysin	Exoenzyme	87.87	99.88	WP_011226733
PCLDDPFM_2	1013686	1014378	STER_RS05310	0.0	Capsule	Immune modulation	87.18	99.86	WP_011681175
PCLDDPFM_2	845248	846294	rfbB	0.0	Capsule	Immune modulation	84.06	99.90	WP_002263087
PCLDDPFM_2	1277863	1278624	srtA	0.0	Sortase A	Exoenzyme	83.77	99.74	-
PCLDDPFM_2	154837	156120	tig/ropA	0.0	Trigger factor	Stress survival	80.76	99.61	WP_000107753
PCLDDPFM_2	1027382	1027965	SPD_RS01775	4.06e-150	Capsule	Immune modulation	83.42	96.20	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PCLDDPFM_2	1281311	1282294	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.95	100.00	AAK75326
PCLDDPFM_2	1269733	1268660	MntE	0.0	manganese homeostasis	95.53	99.72	ABF32167
PCLDDPFM_7	287977	290283	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.41	99.22	AAK74619
PCLDDPFM_2	1387595	1389076	SPD_0310	0.0	UPF0371 protein SPD_0310	93.12	100.00	ABJ54480
PCLDDPFM_2	1250677	1248431	metE	0.0	methionine biosynthesis enzymes	92.66	100.00	AAK74738
PCLDDPFM_2	551761	552729	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
PCLDDPFM_2	23440	24411	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.67	100.00	ABF36968
PCLDDPFM_2	818202	819932	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.95	100.00	AAK34199
PCLDDPFM_7	92031	90043	uvrB	0.0	excinuclease ABC, B subunit	89.74	100.00	AE014259_2
PCLDDPFM_7	128064	126913	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
PCLDDPFM_7	605082	603604	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
PCLDDPFM_2	658121	659422	Eno	0.0	enolase	86.44	99.77	ABP90468
PCLDDPFM_7	589762	587870	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.10	98.90	ABP91129
PCLDDPFM_2	1245510	1247219	PGM	0.0	phosphoglucomutase	84.94	99.65	ACH87041
PCLDDPFM_2	61920	63011	recA	0.0	DNA recombination and repair	84.64	95.36	AAL00560
PCLDDPFM_7	468953	469963	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
PCLDDPFM_2	1108132	1109493	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
PCLDDPFM_2	643711	644601	bglB	1.53e-177	putative phospho--glucosidase	87.88	99.66	AAK33487
PCLDDPFM_2	1204611	1205561	SP_0676	2.38e-169	transcription facot	81.39	98.45	AAK74821
PCLDDPFM_2	1248241	1247384	metF	1.18e-167	methionine biosynthesis enzymes	87.06	99.31	AAK74739
PCLDDPFM_2	968427	969131	covR	3.39e-131	responder protein	85.53	100.00	AAK71319
PCLDDPFM_2	1344200	1343529	rr01	1.01e-126	response regulator	85.27	99.56	CAB54566
PCLDDPFM_2	1241542	1240871	ciaR	1.43e-124	two component system response regulator	86.16	99.12	AIK75708
PCLDDPFM_2	1241542	1240874	CiaR	2.64e-124	two-component response regulator	87.44	99.55	AAK74935
PCLDDPFM_2	968427	969131	walR	2.12e-121	DNA-binding response regulator	81.70	100.00	ANC99504
PCLDDPFM_2	313920	314606	CovR	3.26e-119	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
PCLDDPFM_2	63187	63582	SpxA2	1.47e-74	transcriptional regulator	91.67	100.00	ERL21461
PCLDDPFM_2	1096663	1096262	SpxA1	1.65e-68	transcriptional regulator	82.09	100.00	ERL19273
PCLDDPFM_2	134993	135406	GrpE	2.74e-66	protein grpE	81.16	80.59	ABP89267
PCLDDPFM_2	337132	337419	spr0479	3.94e-47	essential gene	85.42	98.97	AAK99283
PCLDDPFM_2	517660	517914	spr1327	7.61e-44	essential gene	92.94	100.00	AAL00131
PCLDDPFM_7	557342	557605	spr0175	3.48e-42	pathogenitcity related	85.23	100.00	AAK98979
PCLDDPFM_7	558168	558434	spr0177	4.86e-41	essential gene	83.15	88.12	AAK98981
PCLDDPFM_2	156287	156778	RopE (M5005_Spy_1611)	7.21e-72	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
PCLDDPFM_7	287977	290277	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.09	98.08	MYN69560
PCLDDPFM_7	504073	503054	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	97.35	100.00	ABJ55451