Genome ID:GCA_000338735.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FDPJAOBC_1 | 2550925 | 2551779 | aadK | ARO:3002627 | aadK | 97.54 | 100.00 | AL009126.1 |
| FDPJAOBC_1 | 2531624 | 2532826 | blt | ARO:3003006 | blt | 98.50 | 100.00 | L32599.1 |
| FDPJAOBC_1 | 2347535 | 2348704 | bmr | ARO:3003007 | bmr | 99.23 | 100.00 | M33768.1 |
| FDPJAOBC_1 | 1380008 | 1380325 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| FDPJAOBC_1 | 1379670 | 1380008 | ykkC | ARO:3003063 | ykkC | 99.11 | 100.00 | AL009126.1 |
| FDPJAOBC_1 | 926667 | 929240 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.12 | AL009126.3 |
| FDPJAOBC_1 | 591208 | 592836 | vmlR | ARO:3004476 | vmlR | 95.38 | 99.09 | NC_000964.3 |
| FDPJAOBC_1 | 332288 | 332881 | tmrB | ARO:3003059 | tmrB | 97.46 | 100.00 | AL009126.3 |
| FDPJAOBC_1 | 281692 | 283125 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| FDPJAOBC_1 | 268872 | 269792 | mphK | ARO:3004541 | mphK | 98.04 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FDPJAOBC_1 | 2550925 | 2551779 | aadK | Streptomycin | 98.25 | 100.00 | M26879 |
| FDPJAOBC_1 | 268872 | 269792 | mph(K) | Spiramycin, Telithromycin | 97.39 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FDPJAOBC_1 | 268872 | 269789 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.04 | 100.00 | WP_003246254.1 |
| FDPJAOBC_1 | 2550928 | 2551779 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.54 | 100.00 | WP_003229862.1 |
| FDPJAOBC_1 | 591214 | 592836 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 95.38 | 98.90 | WP_003234144.1 |
| FDPJAOBC_1 | 4026861 | 4027379 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
| FDPJAOBC_1 | 2056812 | 2059409 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.29 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| FDPJAOBC_1 | 3527750 | 3528931 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| FDPJAOBC_1 | 3527286 | 3527735 | capC | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | NP_391470 |
| FDPJAOBC_1 | 3526125 | 3527267 | capA | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_391469 |
| FDPJAOBC_1 | 3103564 | 3104349 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.98 | 100.00 | NP_391080 |
| FDPJAOBC_1 | 2149503 | 2150144 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.75 | 100.00 | NP_390062 |
| FDPJAOBC_1 | 3099725 | 3100663 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.72 | 100.00 | NP_391077 |
| FDPJAOBC_1 | 3092575 | 3099705 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.32 | 99.99 | NP_391076 |
| FDPJAOBC_1 | 2011866 | 2013629 | dep/capD | 0.0 | Capsule | Immune modulation | 98.02 | 100.00 | NP_389723 |
| FDPJAOBC_1 | 3102339 | 3103538 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.92 | 100.17 | NP_391079 |
| FDPJAOBC_1 | 3100691 | 3102310 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.59 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FDPJAOBC_1 | 134151 | 135287 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| FDPJAOBC_1 | 20287 | 21156 | pdxS | 5.10e-146 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 82.41 | 98.31 | ACE61268 |
| FDPJAOBC_1 | 1689308 | 1690084 | CodY | 3.29e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| FDPJAOBC_1 | 3371242 | 3371811 | ClpP | 2.44e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |