Genome ID:GCA_000341775.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 14 | 10 | 7 | 18.57 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DLHIPEBN_1 | 1400675 | 1402318 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| DLHIPEBN_1 | 1323368 | 1325938 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| DLHIPEBN_3 | 488197 | 489051 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| DLHIPEBN_3 | 469488 | 470690 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| DLHIPEBN_2 | 425549 | 425866 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| DLHIPEBN_2 | 425211 | 425549 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DLHIPEBN_3 | 247161 | 248330 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| DLHIPEBN_5 | 162848 | 163441 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| DLHIPEBN_5 | 112345 | 113784 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.42 | JYFL01000006.1 |
| DLHIPEBN_5 | 99530 | 100450 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
| DLHIPEBN_8 | 1417 | 2277 | TEM-116 | ARO:3000979 | TEM-116 | 100.00 | 100.00 | U36911.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DLHIPEBN_3 | 488197 | 489051 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| DLHIPEBN_8 | 1417 | 2277 | blaTEM-116 | Amoxicillin, Ampicillin, Cephalothin, Piperacillin, Ticarcillin | 100.00 | 100.00 | AY425988 |
| DLHIPEBN_5 | 99530 | 100450 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| DLHIPEBN_1 | 954967 | 956343 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DLHIPEBN_3 | 488200 | 489051 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| DLHIPEBN_8 | 1417 | 2274 | blaTEM-116 | broad-spectrum class A beta-lactamase TEM-116 | ALLELEX | 100.00 | 100.00 | WP_000027050.1 |
| DLHIPEBN_5 | 99530 | 100447 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| DLHIPEBN_1 | 958343 | 958861 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| DLHIPEBN_1 | 954967 | 956340 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| DLHIPEBN_1 | 1400678 | 1402318 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| DLHIPEBN_4 | 195372 | 197966 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DLHIPEBN_1 | 519305 | 520447 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| DLHIPEBN_1 | 520930 | 522111 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| DLHIPEBN_1 | 520466 | 520915 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| DLHIPEBN_4 | 242861 | 244624 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| DLHIPEBN_1 | 112969 | 113754 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| DLHIPEBN_1 | 109133 | 110071 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| DLHIPEBN_1 | 111747 | 112943 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| DLHIPEBN_1 | 110099 | 111718 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| DLHIPEBN_3 | 47814 | 48455 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| DLHIPEBN_1 | 101977 | 109113 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.99 | 100.00 | NP_391076 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DLHIPEBN_7 | 27995 | 26859 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| DLHIPEBN_8 | 302 | 1102 | URA3 | 8.45e-179 | orotidine 5'-phosphate decarboxylase | 99.62 | 100.00 | AAA34824 |
| DLHIPEBN_9 | 4253 | 5122 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DLHIPEBN_2 | 738813 | 739589 | CodY | 8.25e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DLHIPEBN_1 | 367693 | 368262 | ClpP | 8.97e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| DLHIPEBN_2 | 276388 | 276780 | spxA1 | 2.44e-69 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| DLHIPEBN_3 | 60417 | 60611 | CspD | 5.70e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |