Genome ID：GCA_000344745.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	4	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
CGLIHPIH_1	2735665	2736519	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
CGLIHPIH_1	2716956	2718158	blt	ARO:3003006	blt	100.00	100.00	L32599.1
CGLIHPIH_1	2494639	2495808	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
CGLIHPIH_1	1376853	1377170	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
CGLIHPIH_1	1376515	1376853	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
CGLIHPIH_1	916775	919345	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
CGLIHPIH_1	604733	606376	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
CGLIHPIH_1	339155	339748	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
CGLIHPIH_1	288652	290085	lmrB	ARO:3002813	lmrB	100.00	100.00	JYFL01000006.1
CGLIHPIH_1	275837	276757	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
CGLIHPIH_1	2735665	2736519	aadK	Streptomycin	100.00	100.00	M26879
CGLIHPIH_1	275837	276757	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
CGLIHPIH_1	4187685	4189061	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
CGLIHPIH_1	2735668	2736519	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
CGLIHPIH_1	275837	276754	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
CGLIHPIH_1	4185167	4185685	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
CGLIHPIH_1	4187688	4189061	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
CGLIHPIH_1	604736	606376	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
CGLIHPIH_1	2051334	2053928	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
CGLIHPIH_1	3697827	3698969	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
CGLIHPIH_1	3699452	3700633	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
CGLIHPIH_1	3698988	3699437	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
CGLIHPIH_1	2004676	2006439	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
CGLIHPIH_1	3291491	3292276	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
CGLIHPIH_1	3287655	3288593	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
CGLIHPIH_1	3290269	3291465	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
CGLIHPIH_1	3288621	3290240	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
CGLIHPIH_1	3280499	3287635	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
CGLIHPIH_1	2295301	2295942	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
CGLIHPIH_1	132882	134018	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
CGLIHPIH_1	19074	19943	pdxS	3.13e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
CGLIHPIH_1	1690117	1690893	CodY	3.42e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
CGLIHPIH_1	3546215	3546784	ClpP	2.54e-98	part of proteolytic complex	81.05	97.44	BAB94595