Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 1 | 7 | 7.14 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FBEMLICP_12 | 433345 | 434721 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 87.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FBEMLICP_12 | 433351 | 434721 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 86.21 | 99.78 | WP_003242953.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| FBEMLICP_23 | 514422 | 515603 | capB | 0.0 | Capsule | Immune modulation | 82.46 | 99.66 | NP_391471 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FBEMLICP_8 | 27903 | 26767 | tufA | 0.0 | elongation factor Tu | 86.81 | 95.69 | AHM69299 |
| FBEMLICP_15 | 4426 | 5295 | pdxS | 1.36e-152 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.83 | 98.31 | ACE61268 |
| FBEMLICP_1 | 480713 | 479937 | CodY | 1.04e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| FBEMLICP_34 | 254924 | 255316 | spxA1 | 6.38e-70 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| FBEMLICP_45 | 85951 | 85754 | CspA | 1.35e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| FBEMLICP_34 | 39312 | 39118 | CspB | 6.08e-27 | cold shock protein | 84.61 | 98.48 | CAD00094 |
| FBEMLICP_45 | 85951 | 85757 | CspR | 1.77e-26 | cold shock protein | 80.00 | 98.48 | AAO82613 |
| FBEMLICP_4 | 13062 | 12190 | lipA (SAUSA300_0829) | 3.28e-163 | lipoic acid synthetase | 80.82 | 95.41 | ABD22039 |