Genome ID:GCA_000521305.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 28 | 28 | 39.60 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| OHAMIAHG_1 | 1057818 | 1058687 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| OHAMIAHG_1 | 1057225 | 1057818 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| OHAMIAHG_1 | 1274871 | 1275677 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681437 |
| OHAMIAHG_1 | 1279004 | 1279720 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681442 |
| OHAMIAHG_1 | 1276615 | 1277763 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.91 | 100.00 | WP_011681439 |
| OHAMIAHG_1 | 1279721 | 1280689 | STER_RS07090 | 0.0 | Capsule | Immune modulation | 99.90 | 100.00 | WP_011681443 |
| OHAMIAHG_1 | 1273669 | 1274871 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011681436 |
| OHAMIAHG_1 | 1057225 | 1057818 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| OHAMIAHG_1 | 1270204 | 1271949 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011227426 |
| OHAMIAHG_1 | 1271951 | 1273651 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.82 | 100.00 | WP_041827753 |
| OHAMIAHG_1 | 1275677 | 1276618 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 99.79 | 100.00 | WP_011227430 |
| OHAMIAHG_1 | 1275677 | 1276618 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.68 | 100.00 | WP_011681438 |
| OHAMIAHG_1 | 1057225 | 1057818 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| OHAMIAHG_1 | 1271951 | 1273651 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 99.65 | 100.00 | WP_041827077 |
| OHAMIAHG_1 | 827604 | 829262 | fbp54 | 0.0 | FBPs | Adherence | 99.64 | 100.00 | WP_011227179 |
| OHAMIAHG_1 | 1273669 | 1274871 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | WP_011227428 |
| OHAMIAHG_1 | 42412 | 43251 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.52 | 100.00 | WP_011226733 |
| OHAMIAHG_1 | 1274871 | 1275677 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011227429 |
| OHAMIAHG_1 | 1280707 | 1281684 | STER_RS07095 | 0.0 | Capsule | Immune modulation | 99.39 | 100.00 | WP_011681444 |
| OHAMIAHG_1 | 1276615 | 1277763 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | WP_011227431 |
| OHAMIAHG_1 | 935091 | 935822 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | WP_011226048 |
| OHAMIAHG_1 | 935091 | 935822 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.91 | 100.00 | WP_011227248 |
| OHAMIAHG_1 | 935091 | 935822 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.77 | 100.00 | WP_011681176 |
| OHAMIAHG_1 | 1283058 | 1283909 | rfbD | 0.0 | Capsule | Immune modulation | 98.47 | 100.00 | WP_014621820 |
| OHAMIAHG_1 | 1001954 | 1002747 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.36 | 100.25 | - |
| OHAMIAHG_1 | 1270204 | 1271949 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 98.17 | 100.00 | WP_011681434 |
| OHAMIAHG_1 | 935823 | 937283 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 98.15 | 100.00 | WP_011681177 |
| OHAMIAHG_1 | 1093085 | 1093846 | srtA | 0.0 | Sortase A | Exoenzyme | 97.64 | 100.00 | - |
| OHAMIAHG_1 | 1277882 | 1278658 | STER_RS07075 | 0.0 | Capsule | Immune modulation | 97.04 | 100.00 | WP_011681440 |
| OHAMIAHG_1 | 935823 | 937283 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 96.99 | 100.21 | WP_011226049 |
| OHAMIAHG_1 | 1281681 | 1282939 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 96.51 | 99.92 | WP_011681445 |
| OHAMIAHG_1 | 935823 | 937283 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 96.03 | 100.21 | WP_041827043 |
| OHAMIAHG_1 | 933640 | 934380 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 95.82 | 100.00 | WP_011681174 |
| OHAMIAHG_1 | 934390 | 935082 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 95.53 | 100.00 | WP_011226047 |
| OHAMIAHG_1 | 933640 | 934380 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 95.41 | 100.00 | WP_011226046 |
| OHAMIAHG_1 | 932218 | 933583 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 95.39 | 99.85 | WP_011681173 |
| OHAMIAHG_1 | 934390 | 935082 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 95.24 | 100.00 | WP_011227247 |
| OHAMIAHG_1 | 933645 | 934380 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 95.11 | 98.13 | WP_011227246 |
| OHAMIAHG_1 | 932216 | 933583 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 94.37 | 100.00 | WP_011226045 |
| OHAMIAHG_1 | 934390 | 935082 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 92.64 | 100.00 | WP_011681175 |
| OHAMIAHG_1 | 575849 | 577152 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.02 | 99.46 | WP_000022832 |
| OHAMIAHG_1 | 1565745 | 1566750 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.48 | 98.91 | WP_002986042 |
| OHAMIAHG_1 | 1274871 | 1275677 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| OHAMIAHG_1 | 129280 | 130563 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.73 | 99.77 | WP_000107753 |
| OHAMIAHG_1 | 1055750 | 1056796 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| OHAMIAHG_1 | 922596 | 923179 | SPD_RS01775 | 2.27e-143 | Capsule | Immune modulation | 82.73 | 96.20 | WP_001819836 |
| OHAMIAHG_1 | 1274134 | 1274871 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 84.96 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OHAMIAHG_1 | 689770 | 690843 | MntE | 0.0 | manganese homeostasis | 94.69 | 99.72 | ABF32167 |
| OHAMIAHG_1 | 1096533 | 1097516 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.51 | 100.00 | AAK75326 |
| OHAMIAHG_1 | 492165 | 493133 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| OHAMIAHG_1 | 1447344 | 1449647 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| OHAMIAHG_1 | 1169825 | 1171306 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.71 | 100.00 | ABJ54480 |
| OHAMIAHG_1 | 710505 | 712751 | metE | 0.0 | methionine biosynthesis enzymes | 91.86 | 100.00 | AAK74738 |
| OHAMIAHG_1 | 62043 | 63041 | recA | 0.0 | DNA recombination and repair | 91.29 | 85.82 | AAL00560 |
| OHAMIAHG_1 | 25930 | 26901 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| OHAMIAHG_1 | 1333369 | 1332218 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| OHAMIAHG_1 | 1297086 | 1295098 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.84 | 100.00 | AE014259_2 |
| OHAMIAHG_1 | 1080191 | 1078461 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 88.04 | 100.00 | AAK34199 |
| OHAMIAHG_1 | 1767747 | 1766269 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| OHAMIAHG_1 | 575849 | 577150 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| OHAMIAHG_1 | 1752591 | 1750699 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.74 | 98.90 | ABP91129 |
| OHAMIAHG_1 | 715675 | 713966 | PGM | 0.0 | phosphoglucomutase | 84.06 | 99.65 | ACH87041 |
| OHAMIAHG_1 | 1603185 | 1604195 | pdh | 0.0 | pyruvate dehydrogenase | 82.49 | 99.70 | ABP91006 |
| OHAMIAHG_1 | 856629 | 855268 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| OHAMIAHG_1 | 1655041 | 1653149 | PepO | 0.0 | endopeptidase | 80.19 | 100.00 | ABF32980 |
| OHAMIAHG_1 | 561412 | 562302 | bglB | 1.28e-178 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| OHAMIAHG_1 | 769078 | 768143 | SP_0676 | 7.09e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| OHAMIAHG_1 | 712943 | 713800 | metF | 8.30e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| OHAMIAHG_1 | 974122 | 973418 | covR | 2.03e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| OHAMIAHG_1 | 1150853 | 1150182 | rr01 | 2.88e-124 | response regulator | 83.93 | 99.56 | CAB54566 |
| OHAMIAHG_1 | 974122 | 973418 | walR | 1.91e-121 | DNA-binding response regulator | 81.70 | 100.00 | ANC99504 |
| OHAMIAHG_1 | 282181 | 282867 | CovR | 9.85e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| OHAMIAHG_1 | 719629 | 720297 | CiaR | 1.94e-117 | two-component response regulator | 84.31 | 99.55 | AAK74935 |
| OHAMIAHG_1 | 719629 | 720300 | ciaR | 1.91e-115 | two component system response regulator | 82.14 | 99.12 | AIK75708 |
| OHAMIAHG_1 | 63317 | 63691 | SpxA2 | 1.11e-69 | transcriptional regulator | 91.20 | 94.70 | ERL21461 |
| OHAMIAHG_1 | 130721 | 131221 | RopE (M5005_Spy_1611) | 3.40e-75 | probable DNA-directed RNA polymerase subunit delta | 82.04 | 87.43 | AAK34603 |
| OHAMIAHG_1 | 1447344 | 1449641 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| OHAMIAHG_1 | 1640567 | 1639548 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |