Genome ID:GCA_000572095.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 23 | 29 | 37.01 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| FPNNICCG_1 | 1141982 | 1142851 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| FPNNICCG_1 | 1007102 | 1008562 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_011681177 |
| FPNNICCG_1 | 1347543 | 1348352 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 99.88 | 100.00 | WP_002948020 |
| FPNNICCG_1 | 40378 | 41217 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.76 | 100.00 | WP_011226733 |
| FPNNICCG_1 | 1141389 | 1141982 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| FPNNICCG_1 | 1345263 | 1346318 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 99.62 | 100.00 | WP_002948022 |
| FPNNICCG_11 | 1103 | 2246 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 99.56 | 100.00 | - |
| FPNNICCG_1 | 1141389 | 1141982 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011226149 |
| FPNNICCG_1 | 1346338 | 1347543 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 99.34 | 100.00 | WP_011226326 |
| FPNNICCG_1 | 1141389 | 1141982 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | WP_011226149 |
| FPNNICCG_1 | 1006370 | 1007101 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 99.32 | 100.00 | WP_011681176 |
| FPNNICCG_1 | 1343484 | 1345266 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 99.27 | 99.89 | WP_011226325 |
| FPNNICCG_1 | 907036 | 908694 | fbp54 | 0.0 | FBPs | Adherence | 99.16 | 100.00 | WP_011227179 |
| FPNNICCG_1 | 1348336 | 1349292 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 99.16 | 100.00 | WP_011226328 |
| FPNNICCG_1 | 1349289 | 1350437 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 99.13 | 100.00 | WP_041828290 |
| FPNNICCG_1 | 1351841 | 1352692 | rfbD | 0.0 | Capsule | Immune modulation | 99.06 | 100.00 | WP_014621820 |
| FPNNICCG_1 | 1006370 | 1007101 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.36 | 100.00 | WP_011227248 |
| FPNNICCG_1 | 1006370 | 1007101 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011226048 |
| FPNNICCG_1 | 1176750 | 1177511 | srtA | 0.0 | Sortase A | Exoenzyme | 97.77 | 100.00 | - |
| FPNNICCG_1 | 1004919 | 1005659 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 97.71 | 100.00 | WP_011681174 |
| FPNNICCG_1 | 1004919 | 1005659 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.57 | 100.00 | WP_011226046 |
| FPNNICCG_1 | 1007102 | 1008562 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.40 | 100.21 | WP_011226049 |
| FPNNICCG_1 | 1004924 | 1005659 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 97.28 | 98.13 | WP_011227246 |
| FPNNICCG_1 | 1007102 | 1008562 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 96.85 | 100.21 | WP_041827043 |
| FPNNICCG_1 | 1005669 | 1006361 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 95.67 | 100.00 | WP_011226047 |
| FPNNICCG_1 | 1005669 | 1006361 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 95.38 | 100.00 | WP_011227247 |
| FPNNICCG_1 | 1003496 | 1004863 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 95.33 | 99.93 | WP_011226045 |
| FPNNICCG_1 | 1003498 | 1004863 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 95.10 | 99.71 | WP_011681173 |
| FPNNICCG_1 | 1005669 | 1006361 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 92.93 | 100.00 | WP_011681175 |
| FPNNICCG_1 | 611840 | 613143 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.10 | 99.46 | WP_000022832 |
| FPNNICCG_1 | 1635360 | 1636370 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.33 | 99.51 | WP_002986042 |
| FPNNICCG_1 | 152419 | 153702 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.73 | 99.77 | WP_000107753 |
| FPNNICCG_1 | 1139914 | 1140960 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| FPNNICCG_1 | 513850 | 514433 | SPD_RS01775 | 1.08e-146 | Capsule | Immune modulation | 83.11 | 96.04 | WP_001819836 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FPNNICCG_1 | 764296 | 765369 | MntE | 0.0 | manganese homeostasis | 94.97 | 99.72 | ABF32167 |
| FPNNICCG_1 | 1180198 | 1181181 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| FPNNICCG_1 | 1508049 | 1510352 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| FPNNICCG_1 | 526613 | 527581 | spr0084 | 0.0 | pathogenitcity related | 92.88 | 98.48 | AAK98888 |
| FPNNICCG_1 | 1246558 | 1248039 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.71 | 100.00 | ABJ54480 |
| FPNNICCG_1 | 784802 | 787048 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| FPNNICCG_1 | 73504 | 74502 | recA | 0.0 | DNA recombination and repair | 91.29 | 85.82 | AAL00560 |
| FPNNICCG_1 | 23891 | 24862 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| FPNNICCG_1 | 1395448 | 1394297 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| FPNNICCG_1 | 1367318 | 1365330 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.84 | 100.00 | AE014259_2 |
| FPNNICCG_1 | 1164000 | 1162270 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 88.04 | 100.00 | AAK34199 |
| FPNNICCG_1 | 1823135 | 1821657 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| FPNNICCG_1 | 611840 | 613141 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| FPNNICCG_1 | 1808401 | 1806509 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.74 | 98.90 | ABP91129 |
| FPNNICCG_1 | 789973 | 788264 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| FPNNICCG_1 | 1677463 | 1678473 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| FPNNICCG_1 | 935885 | 934524 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| FPNNICCG_1 | 1728126 | 1726234 | PepO | 0.0 | endopeptidase | 80.19 | 100.00 | ABF32980 |
| FPNNICCG_1 | 597413 | 598303 | bglB | 1.32e-178 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| FPNNICCG_1 | 846732 | 845794 | SP_0676 | 2.33e-167 | transcription facot | 81.15 | 97.20 | AAK74821 |
| FPNNICCG_1 | 787240 | 788097 | metF | 1.51e-164 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| FPNNICCG_1 | 1045638 | 1044934 | covR | 2.10e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| FPNNICCG_1 | 1227589 | 1226918 | rr01 | 2.97e-124 | response regulator | 83.93 | 99.56 | CAB54566 |
| FPNNICCG_1 | 793927 | 794595 | CiaR | 1.27e-122 | two-component response regulator | 86.55 | 99.55 | AAK74935 |
| FPNNICCG_1 | 1045638 | 1044934 | walR | 1.97e-121 | DNA-binding response regulator | 81.70 | 100.00 | ANC99504 |
| FPNNICCG_1 | 793927 | 794598 | ciaR | 1.09e-120 | two component system response regulator | 84.38 | 99.12 | AIK75708 |
| FPNNICCG_1 | 310051 | 310737 | CovR | 1.55e-118 | serves to repress GAS virulence factor-encoding genes | 81.22 | 100.00 | ACE75886 |
| FPNNICCG_1 | 74778 | 75152 | SpxA2 | 1.14e-69 | transcriptional regulator | 91.20 | 94.70 | ERL21461 |
| FPNNICCG_1 | 947248 | 947649 | SpxA1 | 3.72e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| FPNNICCG_1 | 153860 | 154360 | RopE (M5005_Spy_1611) | 4.87e-75 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| FPNNICCG_1 | 1508049 | 1510346 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| FPNNICCG_1 | 1713670 | 1712651 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |