Genome ID:GCA_000598225.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CEKKKIHM_203 | 117837 | 119042 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| CEKKKIHM_135 | 49947 | 50681 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| CEKKKIHM_203 | 22212 | 23114 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
| CEKKKIHM_46 | 622 | 1587 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CEKKKIHM_203 | 22212 | 23114 | cepA | Unknown Beta-lactam | 100.00 | 100.00 | L13472 |
| CEKKKIHM_46 | 622 | 1587 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| CEKKKIHM_135 | 49947 | 50681 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| CEKKKIHM_135 | 51453 | 52350 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.22 | 61.34 | AF227520 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CEKKKIHM_203 | 22215 | 23114 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| CEKKKIHM_46 | 622 | 1584 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| CEKKKIHM_203 | 119067 | 119576 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| CEKKKIHM_135 | 49950 | 50681 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| CEKKKIHM_203 | 117837 | 119039 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| CEKKKIHM_135 | 51456 | 52349 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | PARTIALX | 96.31 | 61.19 | WP_000420317.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||