Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 16 | 0 | 0 | 16.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OFHCKFOO_14 | 180592 | 181494 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
| OFHCKFOO_16 | 41113 | 42318 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
| OFHCKFOO_119 | 29651 | 31624 | tet(Q) | ARO:3000191 | tet(Q) | 97.11 | 100.00 | Z21523.1 |
| OFHCKFOO_69 | 5173 | 5973 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| OFHCKFOO_83 | 5173 | 5973 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| OFHCKFOO_93 | 5173 | 5973 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| OFHCKFOO_69 | 3728 | 4867 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| OFHCKFOO_83 | 3728 | 4918 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 110.31 | AJ311171.1 |
| OFHCKFOO_93 | 3728 | 4867 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| OFHCKFOO_69 | 2393 | 3529 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| OFHCKFOO_83 | 2393 | 3529 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| OFHCKFOO_93 | 2393 | 3529 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| OFHCKFOO_69 | 1354 | 2217 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| OFHCKFOO_83 | 1354 | 2217 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| OFHCKFOO_93 | 1354 | 2217 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OFHCKFOO_119 | 29651 | 31576 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X58717 |
| OFHCKFOO_69 | 5173 | 5973 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| OFHCKFOO_69 | 2393 | 3559 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| OFHCKFOO_14 | 180592 | 181494 | cepA-49 | Unknown Beta-lactam | 99.78 | 100.00 | U05886 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OFHCKFOO_69 | 1357 | 2217 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| OFHCKFOO_83 | 1357 | 2217 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| OFHCKFOO_93 | 1357 | 2217 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| OFHCKFOO_16 | 42343 | 42852 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| OFHCKFOO_119 | 29654 | 31576 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
| OFHCKFOO_69 | 2396 | 3559 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| OFHCKFOO_83 | 2396 | 3559 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| OFHCKFOO_93 | 2396 | 3559 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| OFHCKFOO_69 | 3731 | 4867 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| OFHCKFOO_83 | 3731 | 4867 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| OFHCKFOO_93 | 3731 | 4867 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| OFHCKFOO_14 | 180595 | 181494 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005795628.1 |
| OFHCKFOO_69 | 5173 | 5970 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| OFHCKFOO_83 | 5173 | 5970 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| OFHCKFOO_93 | 5173 | 5970 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| OFHCKFOO_16 | 41113 | 42315 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||