Genome ID:GCA_000699525.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 14 | 10 | 4 | 17.66 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BBIMGCJF_1 | 2945997 | 2946734 | ErmB | ARO:3000375 | ErmB | 97.96 | 98.79 | AF242872.1 |
| BBIMGCJF_1 | 2708448 | 2709302 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| BBIMGCJF_1 | 2689739 | 2690941 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| BBIMGCJF_1 | 2467422 | 2468591 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| BBIMGCJF_1 | 1360406 | 1360723 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| BBIMGCJF_1 | 1360068 | 1360406 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| BBIMGCJF_1 | 900326 | 902896 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| BBIMGCJF_1 | 588283 | 589926 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| BBIMGCJF_1 | 339164 | 339757 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| BBIMGCJF_1 | 288661 | 290094 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| BBIMGCJF_1 | 275846 | 276766 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BBIMGCJF_1 | 2708448 | 2709302 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| BBIMGCJF_1 | 2945997 | 2946734 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | U86375 |
| BBIMGCJF_1 | 275846 | 276766 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| BBIMGCJF_1 | 4165715 | 4167091 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BBIMGCJF_1 | 2708451 | 2709302 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| BBIMGCJF_1 | 2946000 | 2946734 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | EXACTX | 100.00 | 100.00 | WP_001038790.1 |
| BBIMGCJF_1 | 275846 | 276763 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| BBIMGCJF_1 | 4163197 | 4163715 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| BBIMGCJF_1 | 4165718 | 4167091 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| BBIMGCJF_1 | 588286 | 589926 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| BBIMGCJF_1 | 2024103 | 2026697 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BBIMGCJF_1 | 3675859 | 3677001 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| BBIMGCJF_1 | 3677484 | 3678665 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| BBIMGCJF_1 | 3677020 | 3677469 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| BBIMGCJF_1 | 1977445 | 1979208 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| BBIMGCJF_1 | 3269549 | 3270334 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| BBIMGCJF_1 | 3265713 | 3266651 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| BBIMGCJF_1 | 3268327 | 3269523 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| BBIMGCJF_1 | 3266679 | 3268298 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| BBIMGCJF_1 | 3258557 | 3265693 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| BBIMGCJF_1 | 2268070 | 2268711 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BBIMGCJF_1 | 132882 | 134018 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| BBIMGCJF_1 | 19074 | 19943 | pdxS | 3.11e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| BBIMGCJF_1 | 1673670 | 1674446 | CodY | 3.40e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| BBIMGCJF_1 | 3524272 | 3524841 | ClpP | 2.52e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |