Genome ID：GCA_000735115.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
16	10	8	20.49

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
PLLECCHL_2	608270	609124	aadK	ARO:3002627	aadK	97.89	100.00	AL009126.1
PLLECCHL_2	589533	590735	blt	ARO:3003006	blt	99.50	100.00	L32599.1
PLLECCHL_1	432125	432442	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
PLLECCHL_1	431787	432125	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
PLLECCHL_4	396810	398453	vmlR	ARO:3004476	vmlR	98.35	100.00	NC_000964.3
PLLECCHL_2	364549	365718	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
PLLECCHL_5	262927	265497	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
PLLECCHL_4	165601	166194	tmrB	ARO:3003059	tmrB	98.48	100.00	AL009126.3
PLLECCHL_4	115080	116519	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
PLLECCHL_4	102267	103187	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1
PLLECCHL_7	49250	50062	NDM-1	ARO:3000589	NDM-1	100.00	100.00	FN396876.1
PLLECCHL_13	74	934	SHV-12	ARO:3001071	SHV-12	100.00	100.00	KF976405.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
PLLECCHL_7	49250	50062	blaNDM-1	Amoxicillin, Amoxicillin+Clavulanic acid, Ampicillin, Ampicillin+Clavulanic acid, Cefepime, Cefixime, Cefotaxime, Cefoxitin, Ceftazidime, Ceftazidime+Avibactam, Ertapenem, Imipenem, Meropenem, Piperacillin, Piperacillin+Tazobactam, Temocillin	100.00	100.00	FN396876
PLLECCHL_13	74	934	blaSHV-12	Amoxicillin, Ampicillin, Aztreonam, Cefepime, Cefotaxime, Ceftazidime, Ceftriaxone, Piperacillin, Ticarcillin	100.00	100.00	KF976405
PLLECCHL_4	102267	103187	mph(K)	Spiramycin, Telithromycin	99.89	100.00	NC_000964
PLLECCHL_3	1007274	1008650	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	99.06	100.00	D12567
PLLECCHL_2	608272	609124	aadK	Streptomycin	98.59	99.77	M26879

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
PLLECCHL_7	49250	50059	blaNDM-1	subclass B1 metallo-beta-lactamase NDM-1	ALLELEX	100.00	100.00	WP_004201164.1
PLLECCHL_13	74	931	blaSHV-12	extended-spectrum class A beta-lactamase SHV-12	ALLELEX	100.00	100.00	WP_002904004.1
PLLECCHL_7	50066	50428	ble	bleomycin binding protein Ble-MBL	EXACTX	100.00	100.00	WP_004201167.1
PLLECCHL_4	102267	103184	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
PLLECCHL_3	1007277	1008650	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.91	100.00	WP_063856081.1
PLLECCHL_4	396813	398453	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.35	100.00	WP_003234144.1
PLLECCHL_2	608273	609124	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.89	100.00	WP_003229862.1
PLLECCHL_3	1004722	1005240	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1
PLLECCHL_2	55644	58238	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PLLECCHL_3	113897	114835	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.68	100.00	NP_391077
PLLECCHL_3	526807	527988	capB	0.0	Capsule	Immune modulation	99.58	100.00	NP_391471
PLLECCHL_3	117733	118518	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.49	100.00	NP_391080
PLLECCHL_3	525182	526324	capA	0.0	Capsule	Immune modulation	99.47	100.00	NP_391469
PLLECCHL_2	165182	165823	hlyIII	0.0	Hemolysin III	Exotoxin	99.38	100.00	NP_390062
PLLECCHL_3	526343	526792	capC	0.0	Capsule	Immune modulation	99.33	100.00	NP_391470
PLLECCHL_2	10220	11983	dep/capD	0.0	Capsule	Immune modulation	99.04	100.00	NP_389723
PLLECCHL_3	116511	117707	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.00	100.00	NP_391079
PLLECCHL_3	106741	113877	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.98	100.00	NP_391076
PLLECCHL_3	114863	116482	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	98.89	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PLLECCHL_6	31797	32933	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
PLLECCHL_7	49250	50059	NDM-1	2.91e-159	carbapenemase	100.00	100.00	AJD76950
PLLECCHL_9	4390	5259	pdxS	1.24e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
PLLECCHL_1	745468	746244	CodY	9.38e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
PLLECCHL_3	373585	374154	ClpP	6.33e-99	part of proteolytic complex	81.05	97.44	BAB94595
PLLECCHL_1	280990	281382	spxA1	7.37e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
PLLECCHL_1	280990	281382	spx	4.40e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
PLLECCHL_8	20810	21052	SpoVG	7.75e-39	RNA-binding protein	81.48	79.41	AAT02994
PLLECCHL_4	350066	350263	CspA	1.85e-31	cold shock protein	90.91	100.00	CAA62903