Genome ID:GCA_000737405.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EELKHGFB_1 | 2541830 | 2542684 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| EELKHGFB_1 | 2523125 | 2524327 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| EELKHGFB_1 | 2300814 | 2301983 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| EELKHGFB_1 | 1317363 | 1317680 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| EELKHGFB_1 | 1317025 | 1317363 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| EELKHGFB_1 | 858160 | 860730 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| EELKHGFB_1 | 568190 | 569833 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| EELKHGFB_1 | 322705 | 323298 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| EELKHGFB_1 | 272178 | 273611 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| EELKHGFB_1 | 259363 | 260283 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EELKHGFB_1 | 2541830 | 2542684 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| EELKHGFB_1 | 4031353 | 4032729 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
| EELKHGFB_1 | 259363 | 260283 | mph(K) | Spiramycin, Telithromycin | 97.72 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EELKHGFB_1 | 2541833 | 2542684 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| EELKHGFB_1 | 4031356 | 4032729 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| EELKHGFB_1 | 568193 | 569833 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| EELKHGFB_1 | 259363 | 260280 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| EELKHGFB_1 | 4028894 | 4029412 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
| EELKHGFB_1 | 1991888 | 1994482 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| EELKHGFB_1 | 3542352 | 3543494 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| EELKHGFB_1 | 3543977 | 3545158 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| EELKHGFB_1 | 3543513 | 3543962 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| EELKHGFB_1 | 1945231 | 1946994 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| EELKHGFB_1 | 3136013 | 3136798 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| EELKHGFB_1 | 2101437 | 2102078 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| EELKHGFB_1 | 3132177 | 3133115 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.89 | 100.00 | NP_391077 |
| EELKHGFB_1 | 3134791 | 3135987 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.67 | 100.00 | NP_391079 |
| EELKHGFB_1 | 3125021 | 3132157 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.58 | 100.00 | NP_391076 |
| EELKHGFB_1 | 3133143 | 3134762 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.57 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EELKHGFB_1 | 126806 | 127942 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| EELKHGFB_1 | 19074 | 19943 | pdxS | 3.01e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| EELKHGFB_1 | 1630658 | 1631434 | CodY | 3.29e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| EELKHGFB_1 | 3390739 | 3391308 | ClpP | 2.44e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |