Genome ID:GCA_000747645.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 10 | 10 | 9 | 16.76 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HFNFGPLJ_193 | 29813 | 30733 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
| HFNFGPLJ_192 | 10490 | 11929 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.42 | JYFL01000006.1 |
| HFNFGPLJ_107 | 9671 | 10264 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| HFNFGPLJ_258 | 6872 | 8074 | blt | ARO:3003006 | blt | 98.00 | 100.00 | L32599.1 |
| HFNFGPLJ_155 | 6181 | 6519 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| HFNFGPLJ_155 | 5864 | 6181 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| HFNFGPLJ_259 | 4537 | 5391 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| HFNFGPLJ_1 | 1824 | 3470 | vmlR | ARO:3004476 | vmlR | 98.36 | 100.18 | NC_000964.3 |
| HFNFGPLJ_255 | 1550 | 4120 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.53 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HFNFGPLJ_259 | 4537 | 5391 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| HFNFGPLJ_193 | 29813 | 30733 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HFNFGPLJ_193 | 29813 | 30721 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| HFNFGPLJ_259 | 4537 | 5388 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| HFNFGPLJ_1 | 1824 | 3467 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.36 | 100.00 | WP_003234144.1 |
| HFNFGPLJ_80 | 12704 | 13222 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| HFNFGPLJ_145 | 14575 | 15756 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| HFNFGPLJ_220 | 2600 | 3385 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| HFNFGPLJ_145 | 12950 | 14092 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| HFNFGPLJ_219 | 2884 | 10020 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.30 | 100.00 | NP_391076 |
| HFNFGPLJ_344 | 1424 | 3187 | dep/capD | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_389723 |
| HFNFGPLJ_219 | 1926 | 2864 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.04 | 100.00 | NP_391077 |
| HFNFGPLJ_220 | 3411 | 4355 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.94 | 78.95 | NP_391079 |
| HFNFGPLJ_267 | 12735 | 13376 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| HFNFGPLJ_145 | 14111 | 14560 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| HFNFGPLJ_219 | 279 | 1898 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.73 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HFNFGPLJ_313 | 22467 | 21331 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| HFNFGPLJ_318 | 11201 | 10332 | pdxS | 1.94e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| HFNFGPLJ_171 | 30455 | 31231 | CodY | 8.91e-126 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| HFNFGPLJ_272 | 426 | 995 | ClpP | 4.85e-101 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| HFNFGPLJ_304 | 18176 | 17784 | spxA1 | 2.63e-71 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| HFNFGPLJ_304 | 18176 | 17784 | spx | 1.57e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| HFNFGPLJ_316 | 2024 | 2266 | SpoVG | 1.55e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| HFNFGPLJ_328 | 34898 | 34701 | CspA | 2.10e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| HFNFGPLJ_267 | 24606 | 24800 | CspD | 1.92e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| HFNFGPLJ_27 | 1502 | 1696 | CspB | 1.20e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |