Genome ID:GCA_000773655.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 10 | 10.05 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FNFGACOM_2 | 57081 | 58281 | mef(A) | Erythromycin, Azithromycin | 94.67 | 98.60 | AF227520 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNFGACOM_2 | 57078 | 58280 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.75 | 98.28 | WP_012102963.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FNFGACOM_60 | 32442 | 33620 | tufA | 0.0 | elongation factor Tu | 85.75 | 99.49 | AHM69299 |
| FNFGACOM_65 | 28010 | 26505 | atpA | 0.0 | ATP synthase subunit alpha | 80.08 | 100.00 | ABD31377 |
| FNFGACOM_110 | 11552 | 10683 | pdxS | 1.51e-152 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| FNFGACOM_85 | 23736 | 24512 | CodY | 3.16e-128 | nutrient-responsive regulator | 81.85 | 100.00 | ACJ80679 |
| FNFGACOM_85 | 23736 | 24512 | codY | 1.52e-124 | global regulator and isoleucine sensor | 80.69 | 100.00 | ASW39076 |
| FNFGACOM_115 | 13346 | 12777 | ClpP | 6.19e-105 | part of proteolytic complex | 83.16 | 97.44 | BAB94595 |
| FNFGACOM_107 | 68414 | 67728 | WalR | 8.64e-104 | transcriptional regulatory protein | 80.79 | 97.44 | EPH95667 |
| FNFGACOM_72 | 24355 | 23963 | spxA1 | 1.08e-72 | redox-responsive transcription factor | 87.79 | 100.00 | AAF21893 |
| FNFGACOM_72 | 24355 | 23963 | spx | 2.26e-67 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| FNFGACOM_108 | 18643 | 18885 | SpoVG | 2.94e-40 | RNA-binding protein | 82.72 | 79.41 | AAT02994 |
| FNFGACOM_30 | 392 | 589 | CspA | 1.52e-31 | cold shock protein | 83.33 | 100.00 | CAA62903 |
| FNFGACOM_85 | 136067 | 135873 | CspD | 3.57e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| FNFGACOM_85 | 136067 | 135870 | CspB | 2.40e-28 | cold shock protein | 80.30 | 100.00 | CAD00094 |