Genome ID:GCA_000789275.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EFAOIOIL_1 | 2735694 | 2736548 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| EFAOIOIL_1 | 2716985 | 2718187 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| EFAOIOIL_1 | 2494667 | 2495836 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| EFAOIOIL_1 | 1376867 | 1377184 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| EFAOIOIL_1 | 1376529 | 1376867 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| EFAOIOIL_1 | 916787 | 919357 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| EFAOIOIL_1 | 604744 | 606387 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| EFAOIOIL_1 | 339163 | 339756 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| EFAOIOIL_1 | 288660 | 290093 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| EFAOIOIL_1 | 275845 | 276765 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EFAOIOIL_1 | 2735694 | 2736548 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| EFAOIOIL_1 | 275845 | 276765 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| EFAOIOIL_1 | 4187694 | 4189070 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EFAOIOIL_1 | 2735697 | 2736548 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| EFAOIOIL_1 | 275845 | 276762 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| EFAOIOIL_1 | 4185176 | 4185694 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| EFAOIOIL_1 | 4187697 | 4189070 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| EFAOIOIL_1 | 604747 | 606387 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| EFAOIOIL_1 | 2051347 | 2053941 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| EFAOIOIL_1 | 3697833 | 3698975 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| EFAOIOIL_1 | 3699458 | 3700639 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| EFAOIOIL_1 | 3698994 | 3699443 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| EFAOIOIL_1 | 2004689 | 2006452 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| EFAOIOIL_1 | 3291523 | 3292308 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| EFAOIOIL_1 | 3287687 | 3288625 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| EFAOIOIL_1 | 3290301 | 3291497 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| EFAOIOIL_1 | 3288653 | 3290272 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| EFAOIOIL_1 | 3280531 | 3287667 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| EFAOIOIL_1 | 2295315 | 2295956 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EFAOIOIL_1 | 132882 | 134018 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| EFAOIOIL_1 | 19074 | 19943 | pdxS | 3.13e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| EFAOIOIL_1 | 1690131 | 1690907 | CodY | 3.42e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| EFAOIOIL_1 | 3546246 | 3546815 | ClpP | 2.54e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |