Genome ID:GCA_000817575.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2244.90

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
PLHNABBH_123896232390672clbAARO:3002814clbA99.43100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
PLHNABBH_123896372390672cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.8098.67KR610408
PLHNABBH_1375860377236tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline86.78100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
PLHNABBH_123896262390672clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.43100.00WP_012116915.1
PLHNABBH_1375860377230tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.6599.78WP_003242953.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
PLHNABBH_134356623436843capB0.0CapsuleImmune modulation81.8799.66NP_391471
PLHNABBH_134368583437307capC1.48e-113CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
PLHNABBH_128190602817924tufA0.0elongation factor Tu86.8195.69AHM69299
PLHNABBH_129338712933002pdxS3.33e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
PLHNABBH_113140511313275CodY4.71e-124nutrient-responsive regulator81.08100.00ACJ80679
PLHNABBH_138398313840703lipA (SAUSA300_0829)1.28e-161lipoic acid synthetase80.8295.41ABD22039