Genome ID:GCA_000827065.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DOFNABAN_1 | 2715175 | 2716029 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| DOFNABAN_1 | 2696466 | 2697668 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| DOFNABAN_1 | 2474149 | 2475318 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| DOFNABAN_1 | 1356347 | 1356664 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| DOFNABAN_1 | 1356009 | 1356347 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DOFNABAN_1 | 896267 | 898837 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| DOFNABAN_1 | 584224 | 585867 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| DOFNABAN_1 | 339156 | 339749 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| DOFNABAN_1 | 288653 | 290086 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| DOFNABAN_1 | 275838 | 276758 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DOFNABAN_1 | 2715175 | 2716029 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| DOFNABAN_1 | 275838 | 276758 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| DOFNABAN_1 | 4167177 | 4168553 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DOFNABAN_1 | 2715178 | 2716029 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| DOFNABAN_1 | 275838 | 276755 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| DOFNABAN_1 | 4164659 | 4165177 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| DOFNABAN_1 | 4167180 | 4168553 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| DOFNABAN_1 | 584227 | 585867 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| DOFNABAN_1 | 2030826 | 2033420 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DOFNABAN_1 | 3677316 | 3678458 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| DOFNABAN_1 | 3678941 | 3680122 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| DOFNABAN_1 | 3678477 | 3678926 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| DOFNABAN_1 | 1984168 | 1985931 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| DOFNABAN_1 | 3271005 | 3271790 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| DOFNABAN_1 | 3267169 | 3268107 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| DOFNABAN_1 | 3269783 | 3270979 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| DOFNABAN_1 | 3268135 | 3269754 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| DOFNABAN_1 | 3260013 | 3267149 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| DOFNABAN_1 | 2274794 | 2275435 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DOFNABAN_1 | 132882 | 134018 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| DOFNABAN_1 | 19074 | 19943 | pdxS | 3.12e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DOFNABAN_1 | 1669611 | 1670387 | CodY | 3.40e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DOFNABAN_1 | 3525728 | 3526297 | ClpP | 2.52e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |