Genome ID:GCA_000828495.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1010916.76

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
DICDKBPA_46100671101840bmrARO:3003007bmr99.23100.00M33768.1
DICDKBPA_1324815850728Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
DICDKBPA_332753228965lmrBARO:3002813lmrB98.95100.00JYFL01000006.1
DICDKBPA_1746815019ykkCARO:3003063ykkC99.11100.00AL009126.1
DICDKBPA_1743644681ykkDARO:3003064ykkD99.05100.00AL009126.1
DICDKBPA_642741128aadKARO:3002627aadK97.89100.00AL009126.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
DICDKBPA_1317937280748tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.35100.00X08034
DICDKBPA_642761128aadKStreptomycin98.5999.77M26879
DICDKBPA_334085441773mph(K)Spiramycin, Telithromycin97.3999.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
DICDKBPA_1317937580748tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.13100.00WP_003242953.1
DICDKBPA_642771128aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.89100.00WP_003229862.1
DICDKBPA_624412445764vmlRABC-F type ribosomal protection protein VmlRINTERNAL_STOP97.62100.00WP_003234144.1
DICDKBPA_1317687377391satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
DICDKBPA_923242633364dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
DICDKBPA_1584220543386capB0.0CapsuleImmune modulation99.58100.00NP_391471
DICDKBPA_923626237047dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
DICDKBPA_16114813244dep/capD0.0CapsuleImmune modulation99.26100.00NP_389723
DICDKBPA_1584386945011capA0.0CapsuleImmune modulation99.21100.00NP_391469
DICDKBPA_1584340143850capC0.0CapsuleImmune modulation98.89100.00NP_391470
DICDKBPA_923504036236dhbC0.0BacillibactinNutritional/Metabolic factor98.83100.00NP_391079
DICDKBPA_922527032406dhbF0.0BacillibactinNutritional/Metabolic factor98.43100.00NP_391076
DICDKBPA_381094311584hlyIII0.0Hemolysin IIIExotoxin97.82100.00NP_390062
DICDKBPA_923339235011dhbE0.0BacillibactinNutritional/Metabolic factor97.78100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
DICDKBPA_1302802826892tufA0.0elongation factor Tu85.7595.69AHM69299
DICDKBPA_10942875156pdxS1.94e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
DICDKBPA_86156265157041CodY2.24e-125nutrient-responsive regulator81.08100.00ACJ80679
DICDKBPA_1385402754596ClpP6.86e-100part of proteolytic complex81.0597.44BAB94595
DICDKBPA_475181452206spxA19.75e-71redox-responsive transcription factor83.97100.00AAF21893
DICDKBPA_475181452206spx5.82e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
DICDKBPA_1053463334391SpoVG7.49e-39RNA-binding protein81.4879.41AAT02994
DICDKBPA_15740174214CspA2.56e-33cold shock protein90.91100.00CAA62903
DICDKBPA_382354623740CspD1.19e-28cold shock protein81.5498.48CAC99957
DICDKBPA_153190853191047CspB1.86e-27cold shock protein83.0898.48CAD00094