Genome ID:GCA_000830595.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1110816.88

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
NBDGHGEL_50157812158405tmrBARO:3003059tmrB96.95100.00AL009126.3
NBDGHGEL_7157170158339bmrARO:3003007bmr99.74100.00M33768.1
NBDGHGEL_50109940111379lmrBARO:3002813lmrB98.74100.42JYFL01000006.1
NBDGHGEL_49048290820ykkCARO:3003063ykkC99.11100.00AL009126.1
NBDGHGEL_49016590482ykkDARO:3003064ykkD98.10100.00AL009126.1
NBDGHGEL_491741718619bltARO:3003006blt100.00100.00L32599.1
NBDGHGEL_1938811958Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
NBDGHGEL_652851139aadKARO:3002627aadK97.89100.00AL009126.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
NBDGHGEL_652871139aadKStreptomycin98.4899.77M26879
NBDGHGEL_509712998048mph(K)Spiramycin, Telithromycin97.6199.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
NBDGHGEL_652881139aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.89100.00WP_003229862.1
NBDGHGEL_142894330583vmlRABC-F type ribosomal protection protein VmlRINTERNAL_STOP97.62100.00WP_003234144.1
NBDGHGEL_98797888496satAstreptothricin N-acetyltransferase SatABLASTX93.06100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
NBDGHGEL_6316492791capA0.0CapsuleImmune modulation99.65100.00NP_391469
NBDGHGEL_6332744455capB0.0CapsuleImmune modulation99.58100.00NP_391471
NBDGHGEL_5199916100854dhbB0.0BacillibactinNutritional/Metabolic factor99.57100.00NP_391077
NBDGHGEL_51103741104526dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
NBDGHGEL_402141423177dep/capD0.0CapsuleImmune modulation99.26100.00NP_389723
NBDGHGEL_6328103259capC0.0CapsuleImmune modulation99.11100.00NP_391470
NBDGHGEL_519276099896dhbF0.0BacillibactinNutritional/Metabolic factor99.03100.00NP_391076
NBDGHGEL_51102519103715dhbC0.0BacillibactinNutritional/Metabolic factor98.58100.00NP_391079
NBDGHGEL_579759698237hlyIII0.0Hemolysin IIIExotoxin97.82100.00NP_390062
NBDGHGEL_51100882102501dhbE0.0BacillibactinNutritional/Metabolic factor97.78100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
NBDGHGEL_643170632842tufA0.0elongation factor Tu85.7595.69AHM69299
NBDGHGEL_291118710318pdxS1.94e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
NBDGHGEL_20154854154078CodY2.84e-125nutrient-responsive regulator81.08100.00ACJ80679
NBDGHGEL_34185809186378ClpP1.50e-99part of proteolytic complex81.0597.44BAB94595
NBDGHGEL_414611645724spxA13.54e-71redox-responsive transcription factor83.97100.00AAF21893
NBDGHGEL_414611645724spx2.11e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
NBDGHGEL_443464034398SpoVG7.49e-39RNA-binding protein81.4879.41AAT02994
NBDGHGEL_3740264223CspA6.69e-32cold shock protein89.39100.00CAA62903
NBDGHGEL_578574485550CspD3.36e-28cold shock protein80.0098.48CAC99957
NBDGHGEL_578574485547CspB6.97e-28cold shock protein80.30100.00CAD00094
NBDGHGEL_3740264220CspR2.10e-27cold shock protein80.0098.48AAO82613