Genome ID：GCA_000830605.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
11	10	8	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
HLINHCAJ_3	139919	140512	tmrB	ARO:3003059	tmrB	96.95	100.00	AL009126.3
HLINHCAJ_9	94333	94650	ykkD	ARO:3003064	ykkD	98.10	100.00	AL009126.1
HLINHCAJ_9	93995	94333	ykkC	ARO:3003063	ykkC	99.11	100.00	AL009126.1
HLINHCAJ_3	92047	93486	lmrB	ARO:3002813	lmrB	98.74	100.42	JYFL01000006.1
HLINHCAJ_47	11950	13152	blt	ARO:3003006	blt	100.00	100.00	L32599.1
HLINHCAJ_67	9386	11956	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3
HLINHCAJ_36	9052	10221	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
HLINHCAJ_59	2713	3567	aadK	ARO:3002627	aadK	97.89	100.00	AL009126.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
HLINHCAJ_59	2713	3565	aadK	Streptomycin	98.48	99.77	M26879
HLINHCAJ_3	79236	80155	mph(K)	Spiramycin, Telithromycin	97.61	99.89	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
HLINHCAJ_59	2713	3564	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.89	100.00	WP_003229862.1
HLINHCAJ_16	28941	30581	vmlR	ABC-F type ribosomal protection protein VmlR	INTERNAL_STOP	97.62	100.00	WP_003234144.1
HLINHCAJ_17	25401	25919	satA	streptothricin N-acetyltransferase SatA	BLASTX	93.06	100.00	WP_003242546.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
HLINHCAJ_58	60931	62073	capA	0.0	Capsule	Immune modulation	99.65	100.00	NP_391469
HLINHCAJ_58	59267	60448	capB	0.0	Capsule	Immune modulation	99.58	100.00	NP_391471
HLINHCAJ_68	73242	74180	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.57	100.00	NP_391077
HLINHCAJ_68	69570	70355	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
HLINHCAJ_45	21412	23175	dep/capD	0.0	Capsule	Immune modulation	99.26	100.00	NP_389723
HLINHCAJ_58	60463	60912	capC	0.0	Capsule	Immune modulation	99.11	100.00	NP_391470
HLINHCAJ_68	74200	81336	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.03	100.00	NP_391076
HLINHCAJ_68	70381	71577	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.58	100.00	NP_391079
HLINHCAJ_31	97594	98235	hlyIII	0.0	Hemolysin III	Exotoxin	97.82	100.00	NP_390062
HLINHCAJ_68	71595	73214	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.78	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
HLINHCAJ_28	31704	32840	tufA	0.0	elongation factor Tu	85.75	95.69	AHM69299
HLINHCAJ_21	11185	10316	pdxS	1.94e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.45	98.31	ACE61268
HLINHCAJ_32	195955	196731	CodY	2.84e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
HLINHCAJ_40	185862	186431	ClpP	1.50e-99	part of proteolytic complex	81.05	97.44	BAB94595
HLINHCAJ_30	9666	10058	spxA1	3.54e-71	redox-responsive transcription factor	83.97	100.00	AAF21893
HLINHCAJ_30	9666	10058	spx	2.11e-69	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
HLINHCAJ_43	20535	20777	SpoVG	4.75e-39	RNA-binding protein	81.48	79.41	AAT02994
HLINHCAJ_16	75760	75563	CspA	1.37e-31	cold shock protein	89.39	100.00	CAA62903
HLINHCAJ_31	85742	85548	CspD	3.36e-28	cold shock protein	80.00	98.48	CAC99957
HLINHCAJ_31	85742	85545	CspB	6.96e-28	cold shock protein	80.30	100.00	CAD00094
HLINHCAJ_16	75760	75566	CspR	4.30e-27	cold shock protein	80.00	98.48	AAO82613