Genome ID:GCA_000830645.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1110917.38

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
LBGLJAEN_22537002538204bltARO:3003006blt99.75100.00L32599.1
LBGLJAEN_25345849346769mphKARO:3004541mphK97.39100.00CP010314.1
LBGLJAEN_25332523333956lmrBARO:3002813lmrB99.16100.00JYFL01000006.1
LBGLJAEN_22312156313325bmrARO:3003007bmr99.23100.00M33768.1
LBGLJAEN_25283000283593tmrBARO:3003059tmrB98.98100.00AL009126.3
LBGLJAEN_32267811270381Bacillus subtilis mprFARO:3003324Bsub_mprF99.53100.00AL009126.3
LBGLJAEN_9110611110928ykkDARO:3003064ykkD99.05100.00AL009126.1
LBGLJAEN_9110273110611ykkCARO:3003063ykkC100.00100.00AL009126.1
LBGLJAEN_253703538681vmlRARO:3004476vmlR98.54100.18NC_000964.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
LBGLJAEN_23236681238055tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline98.9899.85D12567
LBGLJAEN_25345849346769mph(K)Spiramycin, Telithromycin97.94100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
LBGLJAEN_253703538678vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
LBGLJAEN_25345852346769mphKmacrolide 2'-phosphotransferase MphKBLASTX97.39100.00WP_003246254.1
LBGLJAEN_23234180234698satAstreptothricin N-acetyltransferase SatABLASTX90.75100.00WP_003242546.1
LBGLJAEN_23236684237577tet(L)tetracycline efflux MFS transporter Tet(L)PARTIALX98.6665.07WP_063856081.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
LBGLJAEN_1499700100638dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
LBGLJAEN_3113810114991capB0.0CapsuleImmune modulation99.66100.00NP_391471
LBGLJAEN_22112535113175hlyIII0.0Hemolysin IIIExotoxin99.5399.84NP_390062
LBGLJAEN_14103525104310dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
LBGLJAEN_149254499680dhbF0.0BacillibactinNutritional/Metabolic factor99.43100.00NP_391076
LBGLJAEN_21307193308956dep/capD0.0CapsuleImmune modulation98.98100.00NP_389723
LBGLJAEN_3115474116616capA0.0CapsuleImmune modulation98.86100.00NP_391469
LBGLJAEN_14102303103499dhbC0.0BacillibactinNutritional/Metabolic factor98.83100.00NP_391079
LBGLJAEN_3115006115455capC0.0CapsuleImmune modulation98.67100.00NP_391470
LBGLJAEN_14100666102285dhbE0.0BacillibactinNutritional/Metabolic factor98.21100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
LBGLJAEN_12790726771tufA0.0elongation factor Tu85.7595.69AHM69299
LBGLJAEN_51117910310pdxS1.10e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
LBGLJAEN_217403574811CodY3.83e-125nutrient-responsive regulator81.08100.00ACJ80679
LBGLJAEN_33153521152952ClpP1.34e-99part of proteolytic complex81.0597.44BAB94595
LBGLJAEN_30292125292517spxA12.15e-70redox-responsive transcription factor83.97100.00AAF21893
LBGLJAEN_30292125292517spx1.28e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
LBGLJAEN_72053620778SpoVG7.49e-39RNA-binding protein81.4879.41AAT02994
LBGLJAEN_258465784460CspA1.90e-31cold shock protein90.91100.00CAA62903
LBGLJAEN_22125141125335CspD3.89e-28cold shock protein81.5498.48CAC99957
LBGLJAEN_303312932935CspB3.10e-27cold shock protein83.0898.48CAD00094