Genome ID:GCA_000830675.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 10 | 10 | 9 | 16.76 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DLFLLOJA_53 | 100073 | 101242 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| DLFLLOJA_123 | 99601 | 99918 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| DLFLLOJA_123 | 99263 | 99601 | ykkC | ARO:3003063 | ykkC | 97.32 | 100.00 | AL009126.1 |
| DLFLLOJA_61 | 44904 | 47474 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| DLFLLOJA_6 | 39569 | 41002 | lmrB | ARO:3002813 | lmrB | 98.95 | 100.00 | JYFL01000006.1 |
| DLFLLOJA_82 | 273 | 1127 | aadK | ARO:3002627 | aadK | 97.54 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DLFLLOJA_33 | 34311 | 35687 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 99.35 | 100.00 | X08034 |
| DLFLLOJA_82 | 275 | 1127 | aadK | Streptomycin | 98.48 | 99.77 | M26879 |
| DLFLLOJA_43 | 17251 | 18170 | mph(K) | Spiramycin, Telithromycin | 97.61 | 99.89 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DLFLLOJA_33 | 34311 | 35684 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.13 | 100.00 | WP_003242953.1 |
| DLFLLOJA_74 | 49788 | 51428 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 97.62 | 100.00 | WP_003234144.1 |
| DLFLLOJA_82 | 276 | 1127 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.54 | 100.00 | WP_003229862.1 |
| DLFLLOJA_33 | 37668 | 38186 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DLFLLOJA_81 | 1639 | 2781 | capA | 0.0 | Capsule | Immune modulation | 99.74 | 100.00 | NP_391469 |
| DLFLLOJA_81 | 3264 | 4445 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| DLFLLOJA_81 | 2800 | 3249 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| DLFLLOJA_11 | 103518 | 104303 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| DLFLLOJA_69 | 1480 | 3243 | dep/capD | 0.0 | Capsule | Immune modulation | 99.26 | 100.00 | NP_389723 |
| DLFLLOJA_11 | 92526 | 99662 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.95 | 100.00 | NP_391076 |
| DLFLLOJA_11 | 102296 | 103492 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.83 | 100.00 | NP_391079 |
| DLFLLOJA_11 | 99682 | 100620 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.62 | 100.00 | NP_391077 |
| DLFLLOJA_11 | 100648 | 102267 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.90 | 100.00 | NP_391078 |
| DLFLLOJA_63 | 48217 | 48858 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 97.82 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DLFLLOJA_89 | 31711 | 32847 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| DLFLLOJA_77 | 4285 | 5154 | pdxS | 1.95e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| DLFLLOJA_117 | 156213 | 156989 | CodY | 1.80e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DLFLLOJA_83 | 161158 | 161727 | ClpP | 1.87e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| DLFLLOJA_51 | 37152 | 36760 | spxA1 | 5.67e-71 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| DLFLLOJA_51 | 37152 | 36760 | spx | 3.38e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| DLFLLOJA_55 | 34631 | 34389 | SpoVG | 7.49e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| DLFLLOJA_74 | 4014 | 4211 | CspA | 3.48e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| DLFLLOJA_63 | 36366 | 36172 | CspD | 7.61e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| DLFLLOJA_133 | 141821 | 142015 | CspB | 1.42e-27 | cold shock protein | 83.08 | 98.48 | CAD00094 |