Genome ID：GCA_000836595.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	24	27	36.12

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
CODMFHAM_1	44156	44995	cbpD	0.0	Autolysin	Exoenzyme	100.00	100.00	WP_011226733
CODMFHAM_1	1040576	1041169	STR_RS05880	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
CODMFHAM_1	1249472	1250281	STU_RS16245	0.0	Capsule	Immune modulation	99.88	100.00	WP_002948020
CODMFHAM_1	1040576	1041169	STER_RS06030	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
CODMFHAM_1	1040576	1041169	STU_RS15260	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
CODMFHAM_1	1250265	1251221	STU_RS16250	0.0	Capsule	Immune modulation	99.48	100.00	WP_011226328
CODMFHAM_1	817371	819029	fbp54	0.0	FBPs	Adherence	99.46	100.00	WP_011227179
CODMFHAM_1	1245412	1247196	STU_RS16230	0.0	Capsule	Immune modulation	99.44	100.00	WP_011226325
CODMFHAM_1	1041169	1042038	rfbA	0.0	Capsule	Immune modulation	99.42	100.00	WP_011681286
CODMFHAM_1	1248267	1249472	STU_RS16240	0.0	Capsule	Immune modulation	99.25	100.00	WP_011226326
CODMFHAM_1	1247193	1248248	STU_RS16235	0.0	Capsule	Immune modulation	99.15	100.00	WP_002948022
CODMFHAM_1	1257765	1258616	rfbD	0.0	Capsule	Immune modulation	98.94	100.00	WP_014621820
CODMFHAM_1	921033	921764	STER_RS05315	0.0	Capsule	Immune modulation	98.91	100.00	WP_011681176
CODMFHAM_1	1075938	1076699	srtA	0.0	Sortase A	Exoenzyme	98.82	100.00	-
CODMFHAM_1	1254426	1255388	STU_RS16260	0.0	Capsule	Immune modulation	98.75	95.25	WP_011226330
CODMFHAM_1	921033	921764	STU_RS14645	0.0	Capsule	Immune modulation	98.63	100.00	WP_011226048
CODMFHAM_1	1251218	1252366	STU_RS16255	0.0	Capsule	Immune modulation	98.52	100.00	WP_041828290
CODMFHAM_1	921033	921764	STR_RS05260	0.0	Capsule	Immune modulation	98.50	100.00	WP_011227248
CODMFHAM_1	1181739	1182879	STER_RS05250	0.0	Capsule	Immune modulation	98.07	80.58	WP_011681165
CODMFHAM_1	921765	923225	STER_RS05320	0.0	Capsule	Immune modulation	97.95	100.00	WP_011681177
CODMFHAM_1	1255391	1256662	STU_RS16265	0.0	Capsule	Immune modulation	97.72	99.76	WP_011226331
CODMFHAM_1	919584	920322	STER_RS05305	0.0	Capsule	Immune modulation	97.43	99.73	WP_011681174
CODMFHAM_1	920332	921024	STR_RS05255	0.0	Capsule	Immune modulation	97.40	100.00	WP_011227247
CODMFHAM_1	920332	921024	STU_RS14640	0.0	Capsule	Immune modulation	97.40	100.00	WP_011226047
CODMFHAM_1	921765	923225	STU_RS14650	0.0	Capsule	Immune modulation	97.19	100.21	WP_011226049
CODMFHAM_1	919584	920322	STU_RS14635	0.0	Capsule	Immune modulation	97.02	99.73	WP_011226046
CODMFHAM_1	919587	920322	STR_RS05250	0.0	Capsule	Immune modulation	96.88	98.13	WP_011227246
CODMFHAM_1	921765	923225	STR_RS05265	0.0	Capsule	Immune modulation	96.23	100.21	WP_041827043
CODMFHAM_1	918157	919524	STU_RS14630	0.0	Capsule	Immune modulation	94.81	100.00	WP_011226045
CODMFHAM_1	918159	919524	STER_RS05300	0.0	Capsule	Immune modulation	94.22	99.85	WP_011681173
CODMFHAM_1	920332	921024	STER_RS05310	0.0	Capsule	Immune modulation	89.77	99.86	WP_011681175
CODMFHAM_1	581465	582768	eno	0.0	Streptococcal enolase	Exoenzyme	88.02	99.54	WP_000022832
CODMFHAM_1	1550040	1551050	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.92	99.51	WP_002986042
CODMFHAM_1	128092	129375	tig/ropA	0.0	Trigger factor	Stress survival	80.65	99.77	WP_000107753
CODMFHAM_1	1039100	1040146	rfbB	0.0	Capsule	Immune modulation	80.23	100.00	WP_009659423

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
CODMFHAM_1	685691	686764	MntE	0.0	manganese homeostasis	94.97	99.72	ABF32167
CODMFHAM_1	1079386	1080369	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
CODMFHAM_1	498122	499090	spr0084	0.0	pathogenitcity related	93.19	98.48	AAK98888
CODMFHAM_1	1427363	1429666	pfl2(Sp_0459)	0.0	formate acetyltransferase	93.10	99.22	AAK74619
CODMFHAM_1	724965	727211	metE	0.0	methionine biosynthesis enzymes	91.72	100.00	AAK74738
CODMFHAM_1	1168121	1169602	SPD_0310	0.0	UPF0371 protein SPD_0310	91.70	100.00	ABJ54480
CODMFHAM_1	63785	64783	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
CODMFHAM_1	27348	28319	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
CODMFHAM_1	1312317	1311166	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
CODMFHAM_1	1272472	1270484	uvrB	0.0	excinuclease ABC, B subunit	88.99	100.00	AE014259_2
CODMFHAM_1	1063187	1061457	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	87.69	100.00	AAK34199
CODMFHAM_1	1725545	1724067	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.42	100.00	ADE32434
CODMFHAM_1	581465	582766	Eno	0.0	enolase	86.21	99.77	ABP90468
CODMFHAM_1	1710348	1708456	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
CODMFHAM_1	730136	728427	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
CODMFHAM_1	1587309	1588319	pdh	0.0	pyruvate dehydrogenase	82.79	99.70	ABP91006
CODMFHAM_1	843918	842557	mnmE	0.0	central tRNA-modifying GTPase	81.80	99.56	ABP90420
CODMFHAM_1	567025	567915	bglB	1.25e-178	putative phospho--glucosidase	88.89	99.66	AAK33487
CODMFHAM_1	782634	781696	SP_0676	1.56e-166	transcription facot	81.15	97.20	AAK74821
CODMFHAM_1	727403	728260	metF	1.52e-163	methionine biosynthesis enzymes	86.01	99.31	AAK74739
CODMFHAM_1	961072	960368	covR	4.14e-130	responder protein	85.11	100.00	AAK71319
CODMFHAM_1	1126869	1126198	rr01	3.91e-125	response regulator	84.38	99.56	CAB54566
CODMFHAM_1	734474	735142	CiaR	2.61e-123	two-component response regulator	87.00	99.55	AAK74935
CODMFHAM_1	734474	735145	ciaR	2.55e-121	two component system response regulator	84.82	99.12	AIK75708
CODMFHAM_1	961072	960368	walR	2.72e-120	DNA-binding response regulator	80.85	100.00	ANC99504
CODMFHAM_1	280258	280944	CovR	9.43e-118	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
CODMFHAM_1	65059	65454	SpxA2	3.47e-74	transcriptional regulator	90.91	100.00	ERL21461
CODMFHAM_1	129533	130033	RopE (M5005_Spy_1611)	4.61e-75	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
CODMFHAM_1	1427363	1429660	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.07	98.08	MYN69560
CODMFHAM_1	1623170	1622151	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451