Genome ID:GCA_000836675.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 22 | 27 | 34.83 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| GNOCJJKC_1 | 1061693 | 1062562 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| GNOCJJKC_1 | 1061100 | 1061693 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| GNOCJJKC_1 | 1290423 | 1291391 | STER_RS07090 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681443 |
| GNOCJJKC_1 | 1061100 | 1061693 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| GNOCJJKC_1 | 1061100 | 1061693 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| GNOCJJKC_1 | 39720 | 40559 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.52 | 100.00 | WP_011226733 |
| GNOCJJKC_1 | 828951 | 830609 | fbp54 | 0.0 | FBPs | Adherence | 99.46 | 100.00 | WP_011227179 |
| GNOCJJKC_1 | 939159 | 939890 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 99.32 | 100.00 | WP_011681176 |
| GNOCJJKC_1 | 1291555 | 1292532 | STER_RS07095 | 0.0 | Capsule | Immune modulation | 99.28 | 100.00 | WP_011681444 |
| GNOCJJKC_1 | 1096827 | 1097588 | srtA | 0.0 | Sortase A | Exoenzyme | 99.21 | 100.00 | - |
| GNOCJJKC_1 | 1288590 | 1289360 | STER_RS07075 | 0.0 | Capsule | Immune modulation | 99.09 | 99.10 | WP_011681440 |
| GNOCJJKC_1 | 939159 | 939890 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.77 | 100.00 | WP_011226048 |
| GNOCJJKC_1 | 939159 | 939890 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.63 | 100.00 | WP_011227248 |
| GNOCJJKC_1 | 929216 | 930606 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 98.56 | 98.16 | WP_011681165 |
| GNOCJJKC_1 | 1289706 | 1290421 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 98.46 | 99.86 | WP_011681442 |
| GNOCJJKC_1 | 1008562 | 1009351 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 97.98 | 99.75 | - |
| GNOCJJKC_1 | 939891 | 941345 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.66 | 100.00 | WP_011226049 |
| GNOCJJKC_1 | 939891 | 941345 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.19 | 99.79 | WP_011681177 |
| GNOCJJKC_1 | 1293906 | 1294757 | rfbD | 0.0 | Capsule | Immune modulation | 97.07 | 100.00 | WP_014621820 |
| GNOCJJKC_1 | 939891 | 941341 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 96.97 | 99.73 | WP_041827043 |
| GNOCJJKC_1 | 1292529 | 1293787 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 96.43 | 99.92 | WP_011681445 |
| GNOCJJKC_1 | 938458 | 939150 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 95.96 | 100.00 | WP_011227247 |
| GNOCJJKC_1 | 938458 | 939150 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 95.96 | 100.00 | WP_011226047 |
| GNOCJJKC_1 | 937708 | 938448 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 91.50 | 100.00 | WP_011226046 |
| GNOCJJKC_1 | 937708 | 938448 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 91.23 | 100.00 | WP_011681174 |
| GNOCJJKC_1 | 936292 | 937651 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 90.81 | 99.42 | WP_011681173 |
| GNOCJJKC_1 | 937713 | 938448 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 90.49 | 98.13 | WP_011227246 |
| GNOCJJKC_1 | 936301 | 937651 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 90.46 | 98.68 | WP_011226045 |
| GNOCJJKC_1 | 938458 | 939150 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 90.19 | 100.00 | WP_011681175 |
| GNOCJJKC_1 | 574464 | 575767 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.10 | 99.46 | WP_000022832 |
| GNOCJJKC_1 | 1577998 | 1579008 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 87.55 | 99.90 | WP_002986042 |
| GNOCJJKC_1 | 120219 | 121502 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.84 | 99.61 | WP_000107753 |
| GNOCJJKC_1 | 1059625 | 1060671 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GNOCJJKC_1 | 1100275 | 1101258 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| GNOCJJKC_1 | 689622 | 690695 | MntE | 0.0 | manganese homeostasis | 94.69 | 99.72 | ABF32167 |
| GNOCJJKC_1 | 490777 | 491745 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| GNOCJJKC_1 | 1456213 | 1458516 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 93.10 | 99.22 | AAK74619 |
| GNOCJJKC_1 | 1178649 | 1180130 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.11 | 100.00 | ABJ54480 |
| GNOCJJKC_1 | 710146 | 712392 | metE | 0.0 | methionine biosynthesis enzymes | 91.72 | 100.00 | AAK74738 |
| GNOCJJKC_1 | 59351 | 60349 | recA | 0.0 | DNA recombination and repair | 91.29 | 85.82 | AAL00560 |
| GNOCJJKC_1 | 23239 | 24210 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| GNOCJJKC_1 | 1339950 | 1338799 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| GNOCJJKC_1 | 1307898 | 1305910 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.84 | 100.00 | AE014259_2 |
| GNOCJJKC_1 | 1084079 | 1082349 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.69 | 100.00 | AAK34199 |
| GNOCJJKC_1 | 1778758 | 1777280 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| GNOCJJKC_1 | 574464 | 575765 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| GNOCJJKC_1 | 1763568 | 1761676 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.05 | 98.90 | ABP91129 |
| GNOCJJKC_1 | 715317 | 713608 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| GNOCJJKC_1 | 1616387 | 1617397 | pdh | 0.0 | pyruvate dehydrogenase | 82.79 | 99.70 | ABP91006 |
| GNOCJJKC_1 | 854200 | 852839 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| GNOCJJKC_1 | 560026 | 560916 | bglB | 1.29e-178 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| GNOCJJKC_1 | 774767 | 773832 | SP_0676 | 7.13e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| GNOCJJKC_1 | 712584 | 713441 | metF | 1.48e-164 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| GNOCJJKC_1 | 978473 | 977769 | covR | 4.23e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| GNOCJJKC_1 | 1150546 | 1149875 | rr01 | 1.45e-123 | response regulator | 83.48 | 99.56 | CAB54566 |
| GNOCJJKC_1 | 978473 | 977769 | walR | 1.78e-121 | DNA-binding response regulator | 82.13 | 100.00 | ANC99504 |
| GNOCJJKC_1 | 277482 | 278168 | CovR | 3.69e-118 | serves to repress GAS virulence factor-encoding genes | 81.22 | 100.00 | ACE75886 |
| GNOCJJKC_1 | 719271 | 719939 | CiaR | 1.95e-117 | two-component response regulator | 84.31 | 99.55 | AAK74935 |
| GNOCJJKC_1 | 719271 | 719942 | ciaR | 1.92e-115 | two component system response regulator | 82.14 | 99.12 | AIK75708 |
| GNOCJJKC_1 | 60625 | 60999 | SpxA2 | 1.11e-69 | transcriptional regulator | 91.20 | 94.70 | ERL21461 |
| GNOCJJKC_1 | 121660 | 122160 | RopE (M5005_Spy_1611) | 4.75e-75 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| GNOCJJKC_1 | 1456213 | 1458510 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 83.07 | 98.08 | MYN69560 |
| GNOCJJKC_1 | 1652248 | 1651229 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |