Genome ID：GCA_000934165.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
19	10	8	22.91

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
ADNMNOJM_3	813823	814473	Streptococcus suis chloramphenicol acetyltransferase	ARO:3004455	Ssui_ACT_CHL	94.91	100.00	AB080798.1
ADNMNOJM_1	678025	679194	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
ADNMNOJM_1	455707	456909	blt	ARO:3003006	blt	100.00	100.00	L32599.1
ADNMNOJM_1	437346	438200	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
ADNMNOJM_3	425549	425866	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
ADNMNOJM_3	425211	425549	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
ADNMNOJM_4	276580	279150	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
ADNMNOJM_6	162573	163166	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
ADNMNOJM_6	112070	113509	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
ADNMNOJM_6	99255	100175	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1
ADNMNOJM_8	29097	30740	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
ADNMNOJM_27	749	2125	tet(L)	ARO:3000179	tet(L)	99.78	100.00	M11036.1
ADNMNOJM_29	616	1353	ErmB	ARO:3000375	ErmB	97.96	98.79	AF242872.1
ADNMNOJM_25	605	1465	TEM-116	ARO:3000979	TEM-116	100.00	100.00	U36911.1
ADNMNOJM_28	574	1344	ANT(4')-Ia	ARO:3002623	ANT(4')-Ia	99.21	101.19	K02551.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
ADNMNOJM_28	583	1344	aadD	Amikacin, Tobramycin	100.00	100.00	M19465
ADNMNOJM_1	437346	438200	aadK	Streptomycin	100.00	100.00	M26879
ADNMNOJM_25	605	1465	blaTEM-116	Amoxicillin, Ampicillin, Cephalothin, Piperacillin, Ticarcillin	100.00	100.00	AY425988
ADNMNOJM_3	813823	814473	cat(pC194)	Chloramphenicol	100.00	100.00	NC_002013
ADNMNOJM_29	616	1353	erm(B)	Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S	100.00	100.00	U86375
ADNMNOJM_6	99255	100175	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
ADNMNOJM_27	749	2125	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	100.00	100.00	M29725
ADNMNOJM_28	1567	1885	bleO	Bleomycin	100.00	79.95	AF051917

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
ADNMNOJM_28	574	1341	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	EXACTX	100.00	100.00	WP_001795128.1
ADNMNOJM_1	437346	438197	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
ADNMNOJM_25	605	1462	blaTEM-116	broad-spectrum class A beta-lactamase TEM-116	ALLELEX	100.00	100.00	WP_000027050.1
ADNMNOJM_3	813823	814470	catA	type A-9 chloramphenicol O-acetyltransferase	EXACTX	100.00	100.00	WP_001010387.1
ADNMNOJM_29	616	1350	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	EXACTX	100.00	100.00	WP_001038790.1
ADNMNOJM_6	99255	100172	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
ADNMNOJM_9	301074	301592	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
ADNMNOJM_27	749	2122	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_001574277.1
ADNMNOJM_9	303595	304968	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
ADNMNOJM_8	29097	30737	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
ADNMNOJM_28	1561	1884	bleO	bleomycin binding protein	PARTIALX	100.00	80.60	WP_001242578.1
ADNMNOJM_10	134749	137343	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
ADNMNOJM_2	282496	283638	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
ADNMNOJM_2	284121	285302	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
ADNMNOJM_2	283657	284106	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
ADNMNOJM_10	182146	183909	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
ADNMNOJM_5	112633	113418	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
ADNMNOJM_5	108797	109735	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
ADNMNOJM_5	111411	112607	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
ADNMNOJM_5	109763	111382	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
ADNMNOJM_5	101641	108777	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
ADNMNOJM_7	48321	48962	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
ADNMNOJM_11	31696	32832	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
ADNMNOJM_18	11231	10362	pdxS	1.11e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
ADNMNOJM_3	738766	739542	CodY	8.26e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
ADNMNOJM_2	131032	131601	ClpP	2.65e-99	part of proteolytic complex	81.05	97.44	BAB94595
ADNMNOJM_3	276424	276816	spxA1	2.45e-69	redox-responsive transcription factor	83.21	100.00	AAF21893
ADNMNOJM_13	20556	20798	SpoVG	2.80e-38	RNA-binding protein	80.25	79.41	AAT02994
ADNMNOJM_8	76212	76015	CspA	9.41e-32	cold shock protein	90.91	100.00	CAA62903
ADNMNOJM_7	60924	61118	CspD	1.10e-28	cold shock protein	81.54	98.48	CAC99957