Genome ID:GCA_000953615.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 15 | 10 | 3 | 18.28 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EKFEBFEA_1 | 3258978 | 3260897 | tet(M) | ARO:3000186 | tet(M) | 98.75 | 100.00 | AB039845.1 |
| EKFEBFEA_1 | 2753691 | 2754545 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| EKFEBFEA_1 | 2734982 | 2736184 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| EKFEBFEA_1 | 2512664 | 2513833 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| EKFEBFEA_1 | 1487222 | 1489141 | tet(M) | ARO:3000186 | tet(M) | 98.75 | 100.00 | AB039845.1 |
| EKFEBFEA_1 | 1376829 | 1377146 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| EKFEBFEA_1 | 1376491 | 1376829 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| EKFEBFEA_1 | 916754 | 919324 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| EKFEBFEA_1 | 604721 | 606364 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| EKFEBFEA_1 | 339142 | 339735 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| EKFEBFEA_1 | 288639 | 290072 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| EKFEBFEA_1 | 275824 | 276744 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EKFEBFEA_1 | 2753691 | 2754545 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| EKFEBFEA_1 | 275824 | 276744 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| EKFEBFEA_1 | 4223727 | 4225103 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 100.00 | 100.00 | X08034 |
| EKFEBFEA_1 | 1487222 | 1489141 | tet(M) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X92947 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EKFEBFEA_1 | 2753694 | 2754545 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| EKFEBFEA_1 | 275824 | 276741 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| EKFEBFEA_1 | 4221209 | 4221727 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| EKFEBFEA_1 | 4223730 | 4225103 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| EKFEBFEA_1 | 1487222 | 1489138 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | EXACTX | 100.00 | 100.00 | WP_000691749.1 |
| EKFEBFEA_1 | 3258981 | 3260897 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | EXACTX | 100.00 | 100.00 | WP_000691749.1 |
| EKFEBFEA_1 | 604724 | 606364 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| EKFEBFEA_1 | 2069347 | 2071941 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| EKFEBFEA_1 | 3733866 | 3735008 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| EKFEBFEA_1 | 3735491 | 3736672 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| EKFEBFEA_1 | 3735027 | 3735476 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| EKFEBFEA_1 | 2022689 | 2024452 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| EKFEBFEA_1 | 3327556 | 3328341 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| EKFEBFEA_1 | 3323720 | 3324658 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| EKFEBFEA_1 | 3326334 | 3327530 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| EKFEBFEA_1 | 3324686 | 3326305 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| EKFEBFEA_1 | 3316564 | 3323700 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| EKFEBFEA_1 | 2313312 | 2313953 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EKFEBFEA_1 | 132878 | 134014 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| EKFEBFEA_1 | 19074 | 19943 | pdxS | 3.16e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| EKFEBFEA_1 | 3582279 | 3582848 | ClpP | 2.56e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |