Genome ID：GCA_001043765.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
15	10	9	20.15

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
JGKMBKEH_7	226082	227251	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
JGKMBKEH_13	117091	117429	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
JGKMBKEH_13	116774	117091	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
JGKMBKEH_3	97611	98531	mphK	ARO:3004541	mphK	98.02	100.00	CP010314.1
JGKMBKEH_15	87630	90200	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.88	100.00	AL009126.3
JGKMBKEH_1	50544	51137	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
JGKMBKEH_36	34491	36134	vmlR	ARO:3004476	vmlR	98.35	100.00	NC_000964.3
JGKMBKEH_2	10521	11375	aadK	ARO:3002627	aadK	98.94	100.00	AL009126.1
JGKMBKEH_7	6905	8107	blt	ARO:3003006	blt	100.00	100.00	L32599.1
JGKMBKEH_26	979	1839	TEM-116	ARO:3000979	TEM-116	100.00	100.00	U36911.1
JGKMBKEH_1	46	1479	lmrB	ARO:3002813	lmrB	100.00	100.00	JYFL01000006.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
JGKMBKEH_26	979	1839	blaTEM-116	Amoxicillin, Ampicillin, Cephalothin, Piperacillin, Ticarcillin	100.00	100.00	AY425988
JGKMBKEH_23	38175	39552	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	99.42	100.00	D12567
JGKMBKEH_2	10523	11375	aadK	Streptomycin	98.94	99.77	M26879
JGKMBKEH_3	97611	98531	mph(K)	Spiramycin, Telithromycin	97.61	99.89	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
JGKMBKEH_26	979	1836	blaTEM-116	broad-spectrum class A beta-lactamase TEM-116	ALLELEX	100.00	100.00	WP_000027050.1
JGKMBKEH_23	38175	39272	tet(L)	tetracycline efflux MFS transporter Tet(L)	PARTIALX	99.18	79.91	WP_003242953.1
JGKMBKEH_2	10524	11375	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.94	100.00	WP_003229862.1
JGKMBKEH_36	34494	36134	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.35	100.00	WP_003234144.1
JGKMBKEH_3	97611	98519	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	98.02	99.02	WP_003246254.1
JGKMBKEH_23	41505	42023	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1
JGKMBKEH_34	561075	563672	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.71	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
JGKMBKEH_35	109093	110031	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.89	100.00	NP_391077
JGKMBKEH_12	23751	24932	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
JGKMBKEH_35	101937	109073	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.65	100.00	NP_391076
JGKMBKEH_35	110059	111678	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	99.57	100.00	NP_391078
JGKMBKEH_35	112929	113714	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.49	100.00	NP_391080
JGKMBKEH_34	510614	512377	dep/capD	0.0	Capsule	Immune modulation	99.38	100.00	NP_389723
JGKMBKEH_35	111707	112903	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.25	100.00	NP_391079
JGKMBKEH_7	425808	426449	hlyIII	0.0	Hemolysin III	Exotoxin	99.22	100.00	NP_390062
JGKMBKEH_12	22126	23268	capA	0.0	Capsule	Immune modulation	98.69	100.00	NP_391469
JGKMBKEH_12	23287	23736	capC	0.0	Capsule	Immune modulation	98.67	100.00	NP_391470

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
JGKMBKEH_10	27998	26862	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
JGKMBKEH_19	11206	10337	pdxS	1.10e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
JGKMBKEH_34	195758	196534	CodY	4.69e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
JGKMBKEH_4	81242	81811	ClpP	1.29e-99	part of proteolytic complex	81.05	97.44	BAB94595
JGKMBKEH_32	276321	276713	spxA1	1.96e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
JGKMBKEH_32	276321	276713	spx	1.17e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
JGKMBKEH_31	34656	34414	SpoVG	7.50e-39	RNA-binding protein	81.48	79.41	AAT02994
JGKMBKEH_1	251443	251640	CspA	1.16e-31	cold shock protein	90.91	100.00	CAA62903
JGKMBKEH_7	413845	413651	CspD	3.18e-28	cold shock protein	81.54	98.48	CAC99957
JGKMBKEH_32	33106	32912	CspB	2.82e-27	cold shock protein	83.08	98.48	CAD00094