Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 1 | 0 | 4.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| COEODNAD_344 | 3637 | 4437 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| COEODNAD_344 | 2288 | 3424 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 97.42 | M37699.1 |
| COEODNAD_111 | 312 | 1214 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
| COEODNAD_51 | 3 | 1586 | tet(Q) | ARO:3000191 | tet(Q) | 98.11 | 80.37 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| COEODNAD_344 | 3637 | 4437 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| COEODNAD_344 | 2258 | 3424 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| COEODNAD_111 | 312 | 1214 | cepA | Unknown Beta-lactam | 99.67 | 100.00 | FR688022 |
| COEODNAD_51 | 1 | 1583 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.42 | 82.19 | L33696 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| COEODNAD_111 | 312 | 1211 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005816369.1 |
| COEODNAD_344 | 3640 | 4437 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| COEODNAD_344 | 2258 | 3421 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| COEODNAD_51 | 3 | 1583 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 98.29 | 82.22 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| COEODNAD_201 | 1298 | 2491 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| COEODNAD_201 | 1298 | 2491 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| COEODNAD_201 | 1298 | 2491 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||