Genome ID:GCA_001278955.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210717.12

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OEEIJDKC_7618182618520ykkCARO:3003063ykkC100.00100.00AL009126.1
OEEIJDKC_7617865618182ykkDARO:3003064ykkD99.05100.00AL009126.1
OEEIJDKC_8561055561909aadKARO:3002627aadK97.54100.00AL009126.1
OEEIJDKC_8541874543076bltARO:3003006blt98.75100.00L32599.1
OEEIJDKC_9411939413582vmlRARO:3004476vmlR98.54100.00NC_000964.3
OEEIJDKC_8369940371109bmrARO:3003007bmr99.23100.00M33768.1
OEEIJDKC_10272677275247Bacillus subtilis mprFARO:3003324Bsub_mprF99.88100.00AL009126.3
OEEIJDKC_9161704162297tmrBARO:3003059tmrB98.48100.00AL009126.3
OEEIJDKC_9111146112579lmrBARO:3002813lmrB99.37100.00JYFL01000006.1
OEEIJDKC_99833199251mphKARO:3004541mphK98.69100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OEEIJDKC_63457835954tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.42100.00D12567
OEEIJDKC_99833199251mph(K)Spiramycin, Telithromycin99.13100.00NC_000964
OEEIJDKC_8561057561909aadKStreptomycin98.1299.77M26879

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OEEIJDKC_63457835951tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.34100.00WP_063856081.1
OEEIJDKC_99833199248mphKmacrolide 2'-phosphotransferase MphKBLASTX98.69100.00WP_003246254.1
OEEIJDKC_9411942413582vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
OEEIJDKC_8561058561909aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.54100.00WP_003229862.1
OEEIJDKC_63796438482satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
OEEIJDKC_6518941520122capB0.0CapsuleImmune modulation99.66100.00NP_391471
OEEIJDKC_6938328945464dhbF0.0BacillibactinNutritional/Metabolic factor99.62100.00NP_391076
OEEIJDKC_8170781171422hlyIII0.0Hemolysin IIIExotoxin99.53100.00NP_390062
OEEIJDKC_6933687934472dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
OEEIJDKC_6937370938308dhbB0.0BacillibactinNutritional/Metabolic factor99.25100.00NP_391077
OEEIJDKC_6934498935694dhbC0.0BacillibactinNutritional/Metabolic factor99.17100.00NP_391079
OEEIJDKC_82521426977dep/capD0.0CapsuleImmune modulation99.15100.00NP_389723
OEEIJDKC_6935723937342dhbE0.0BacillibactinNutritional/Metabolic factor99.07100.00NP_391078
OEEIJDKC_6520605521747capA0.0CapsuleImmune modulation98.95100.00NP_391469
OEEIJDKC_6520137520586capC0.0CapsuleImmune modulation98.67100.00NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OEEIJDKC_13171532851tufA0.0elongation factor Tu84.9695.69AHM69299
OEEIJDKC_443415210pdxS1.11e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
OEEIJDKC_7308371307595CodY8.49e-125nutrient-responsive regulator81.08100.00ACJ80679
OEEIJDKC_6681477680908ClpP6.30e-99part of proteolytic complex81.0597.44BAB94595
OEEIJDKC_7770693770301spxA16.67e-70redox-responsive transcription factor83.97100.00AAF21893
OEEIJDKC_7770693770301spx3.98e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
OEEIJDKC_23465234410SpoVG7.50e-39RNA-binding protein81.4879.41AAT02994
OEEIJDKC_9362382362579CspA1.91e-31cold shock protein90.91100.00CAA62903