Genome ID：GCA_001306395.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	25	33	41.40

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
BOIHMMHA_32	1520	2113	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
BOIHMMHA_4	114	1574	STER_RS05320	0.0	Capsule	Immune modulation	99.93	100.00	WP_011681177
BOIHMMHA_32	1520	2113	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
BOIHMMHA_78	13371	14180	STU_RS16245	0.0	Capsule	Immune modulation	99.75	100.00	WP_002948020
BOIHMMHA_32	2113	2982	rfbA	0.0	Capsule	Immune modulation	99.66	100.00	WP_011681286
BOIHMMHA_32	1520	2113	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
BOIHMMHA_21	12951	14609	fbp54	0.0	FBPs	Adherence	99.64	100.00	WP_011227179
BOIHMMHA_78	14164	15120	STU_RS16250	0.0	Capsule	Immune modulation	99.58	100.00	WP_011226328
BOIHMMHA_28	2239	3382	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	99.56	100.00	-
BOIHMMHA_78	9298	11082	STU_RS16230	0.0	Capsule	Immune modulation	99.44	100.00	WP_011226325
BOIHMMHA_78	12166	13371	STU_RS16240	0.0	Capsule	Immune modulation	99.17	100.00	WP_011226326
BOIHMMHA_78	21307	22158	rfbD	0.0	Capsule	Immune modulation	99.06	100.00	WP_014621820
BOIHMMHA_4	1575	2306	STER_RS05315	0.0	Capsule	Immune modulation	98.91	100.00	WP_011681176
BOIHMMHA_37	19440	20408	cbpD	0.0	Autolysin	Exoenzyme	98.86	100.00	WP_082302295
BOIHMMHA_36	24807	25568	srtA	0.0	Sortase A	Exoenzyme	98.82	100.00	-
BOIHMMHA_78	15117	16265	STU_RS16255	0.0	Capsule	Immune modulation	98.78	100.00	WP_041828290
BOIHMMHA_4	1575	2306	STR_RS05260	0.0	Capsule	Immune modulation	98.50	100.00	WP_011227248
BOIHMMHA_4	1575	2306	STU_RS14645	0.0	Capsule	Immune modulation	98.36	100.00	WP_011226048
BOIHMMHA_4	12323	13738	STER_RS05250	0.0	Capsule	Immune modulation	98.23	100.00	WP_011681165
BOIHMMHA_4	3017	3757	STU_RS14635	0.0	Capsule	Immune modulation	98.11	100.00	WP_011226046
BOIHMMHA_4	3017	3757	STER_RS05305	0.0	Capsule	Immune modulation	97.71	100.00	WP_011681174
BOIHMMHA_4	114	1574	STU_RS14650	0.0	Capsule	Immune modulation	97.40	100.21	WP_011226049
BOIHMMHA_4	3017	3752	STR_RS05250	0.0	Capsule	Immune modulation	97.15	98.13	WP_011227246
BOIHMMHA_4	3814	5181	STU_RS14630	0.0	Capsule	Immune modulation	97.00	100.00	WP_011226045
BOIHMMHA_4	114	1574	STR_RS05265	0.0	Capsule	Immune modulation	96.85	100.21	WP_041827043
BOIHMMHA_4	2315	3007	STR_RS05255	0.0	Capsule	Immune modulation	95.38	100.00	WP_011227247
BOIHMMHA_4	2315	3007	STU_RS14640	0.0	Capsule	Immune modulation	95.38	100.00	WP_011226047
BOIHMMHA_78	11079	12146	STU_RS16235	0.0	Capsule	Immune modulation	95.27	101.14	WP_002948022
BOIHMMHA_4	3814	5179	STER_RS05300	0.0	Capsule	Immune modulation	94.58	99.85	WP_011681173
BOIHMMHA_4	2315	3007	STER_RS05310	0.0	Capsule	Immune modulation	90.48	100.00	WP_011681175
BOIHMMHA_78	18930	20204	STU_RS16265	0.0	Capsule	Immune modulation	89.42	99.92	WP_011226331
BOIHMMHA_9	38760	40063	eno	0.0	Streptococcal enolase	Exoenzyme	88.02	99.46	WP_000022832
BOIHMMHA_11	26	1036	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.54	99.41	WP_002986042
BOIHMMHA_72	2124	3407	tig/ropA	0.0	Trigger factor	Stress survival	80.81	99.77	WP_000107753
BOIHMMHA_32	45	1091	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423
BOIHMMHA_4	15558	16141	SPD_RS01775	9.53e-154	Capsule	Immune modulation	83.59	96.20	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
BOIHMMHA_36	22120	21137	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
BOIHMMHA_42	6612	7685	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
BOIHMMHA_80	130154	132457	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
BOIHMMHA_8	12300	13268	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
BOIHMMHA_39	8212	10458	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
BOIHMMHA_20	12554	11073	SPD_0310	0.0	UPF0371 protein SPD_0310	91.70	100.00	ABJ54480
BOIHMMHA_5	19755	20753	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
BOIHMMHA_55	15232	14261	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
BOIHMMHA_80	16147	14996	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.06	99.74	AAL00050
BOIHMMHA_78	35335	33347	uvrB	0.0	excinuclease ABC, B subunit	88.84	100.00	AE014259_2
BOIHMMHA_36	38319	40049	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	88.04	100.00	AAK34199
BOIHMMHA_14	26927	28405	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
BOIHMMHA_9	38760	40061	Eno	0.0	enolase	86.21	99.77	ABP90468
BOIHMMHA_14	42116	44008	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
BOIHMMHA_39	13383	11674	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
BOIHMMHA_1	17995	19005	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
BOIHMMHA_21	36463	35102	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
BOIHMMHA_1	68339	66447	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
BOIHMMHA_9	24324	25214	bglB	1.73e-179	putative phospho--glucosidase	88.55	99.66	AAK33487
BOIHMMHA_70	1144	206	SP_0676	4.30e-169	transcription facot	81.15	97.20	AAK74821
BOIHMMHA_39	10650	11507	metF	1.56e-166	methionine biosynthesis enzymes	86.36	99.31	AAK74739
BOIHMMHA_6	29751	30455	covR	1.27e-132	responder protein	85.53	100.00	AAK71319
BOIHMMHA_20	31529	32200	rr01	9.64e-126	response regulator	83.93	99.56	CAB54566
BOIHMMHA_6	29751	30455	walR	5.37e-123	DNA-binding response regulator	82.13	100.00	ANC99504
BOIHMMHA_10	7607	6921	CovR	1.28e-119	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
BOIHMMHA_39	17337	18005	CiaR	2.08e-119	two-component response regulator	84.31	99.55	AAK74935
BOIHMMHA_39	17337	18008	ciaR	2.05e-117	two component system response regulator	82.14	99.12	AIK75708
BOIHMMHA_5	21029	21403	SpxA2	1.33e-71	transcriptional regulator	91.20	94.70	ERL21461
BOIHMMHA_21	47825	48226	SpxA1	1.35e-67	transcriptional regulator	80.60	100.00	ERL19273
BOIHMMHA_24	13624	13911	spr0479	2.97e-49	essential gene	86.46	98.97	AAK99283
BOIHMMHA_37	61290	61544	spr1327	9.96e-46	essential gene	95.29	100.00	AAL00131
BOIHMMHA_18	20859	20596	spr0175	1.40e-42	pathogenitcity related	84.09	100.00	AAK98979
BOIHMMHA_18	20032	19766	spr0177	3.05e-34	essential gene	84.27	88.12	AAK98981
BOIHMMHA_72	3565	4065	RopE (M5005_Spy_1611)	1.66e-76	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
BOIHMMHA_80	130154	132451	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
BOIHMMHA_1	53879	52860	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451