Genome ID:GCA_001469685.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2188.31

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
JHHGEFGI_2272309273685tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline86.93100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
JHHGEFGI_2272309273679tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.8799.78WP_003242953.1
JHHGEFGI_2271578272096satAstreptothricin N-acetyltransferase SatABLASTX80.35100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
JHHGEFGI_32805829239capB0.0CapsuleImmune modulation82.2999.66NP_391471

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
JHHGEFGI_182796926833tufA0.0elongation factor Tu86.5495.69AHM69299
JHHGEFGI_241242311554pdxS8.73e-153encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
JHHGEFGI_1336344335568CodY7.99e-125nutrient-responsive regulator81.08100.00ACJ80679
JHHGEFGI_5152259151867spxA16.94e-70redox-responsive transcription factor83.21100.00AAF21893
JHHGEFGI_67750077303CspA1.32e-31cold shock protein90.91100.00CAA62903
JHHGEFGI_4216431216237CspD9.37e-28cold shock protein80.0098.48CAC99957
JHHGEFGI_154385944053CspB1.67e-27cold shock protein84.6198.48CAD00094
JHHGEFGI_67750077306CspR1.73e-26cold shock protein80.0098.48AAO82613
JHHGEFGI_3381892382764lipA (SAUSA300_0829)1.27e-162lipoic acid synthetase80.8295.41ABD22039