Genome ID:GCA_001514435.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 34 | 29 | 44.69 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| EGFLEGIP_1 | 886760 | 887599 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| EGFLEGIP_1 | 1412705 | 1413556 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| EGFLEGIP_1 | 1597500 | 1598261 | srtA | 0.0 | Sortase A | Exoenzyme | 100.00 | 100.00 | - |
| EGFLEGIP_1 | 1755021 | 1755944 | STR_RS05205 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227237 |
| EGFLEGIP_1 | 1754111 | 1755061 | STR_RS05210 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227238 |
| EGFLEGIP_1 | 1753004 | 1754086 | STR_RS05215 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227239 |
| EGFLEGIP_1 | 1751940 | 1752914 | STR_RS05220 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227240 |
| EGFLEGIP_1 | 1751455 | 1751934 | STR_RS05225 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827041 |
| EGFLEGIP_1 | 1750144 | 1751262 | STR_RS05230 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_148148887 |
| EGFLEGIP_1 | 1747854 | 1748453 | STR_RS05245 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_196767671 |
| EGFLEGIP_1 | 1745526 | 1746257 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227248 |
| EGFLEGIP_1 | 1633025 | 1633618 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| EGFLEGIP_1 | 1424289 | 1426034 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227426 |
| EGFLEGIP_1 | 1422587 | 1424287 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827077 |
| EGFLEGIP_1 | 1420561 | 1421367 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227429 |
| EGFLEGIP_1 | 1419620 | 1420561 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227430 |
| EGFLEGIP_1 | 1418475 | 1419623 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227431 |
| EGFLEGIP_1 | 75942 | 77600 | fbp54 | 0.0 | FBPs | Adherence | 99.94 | 100.00 | WP_011227179 |
| EGFLEGIP_1 | 1755952 | 1757373 | STR_RS05200 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_011227236 |
| EGFLEGIP_1 | 1744071 | 1745525 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_041827043 |
| EGFLEGIP_1 | 1759067 | 1760125 | waaB | 0.0 | Capsule | Immune modulation | 99.91 | 100.00 | WP_157822584 |
| EGFLEGIP_1 | 1748617 | 1749576 | STR_RS05240 | 0.0 | Capsule | Immune modulation | 99.90 | 100.00 | WP_041827042 |
| EGFLEGIP_1 | 1746968 | 1747717 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 99.87 | 100.00 | WP_011227246 |
| EGFLEGIP_1 | 1746266 | 1746958 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 99.86 | 100.00 | WP_011227247 |
| EGFLEGIP_1 | 1633025 | 1633618 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| EGFLEGIP_1 | 1421367 | 1422569 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011227428 |
| EGFLEGIP_1 | 1633025 | 1633618 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| EGFLEGIP_1 | 1422587 | 1424287 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_041827753 |
| EGFLEGIP_1 | 1421367 | 1422569 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | WP_011681436 |
| EGFLEGIP_1 | 1746266 | 1746958 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 99.57 | 100.00 | WP_011226047 |
| EGFLEGIP_1 | 1420561 | 1421367 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681437 |
| EGFLEGIP_1 | 1419620 | 1420561 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | WP_011681438 |
| EGFLEGIP_1 | 1678882 | 1679672 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 99.37 | 100.00 | - |
| EGFLEGIP_1 | 1418475 | 1419623 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.22 | 100.00 | WP_011681439 |
| EGFLEGIP_1 | 1632156 | 1633025 | rfbA | 0.0 | Capsule | Immune modulation | 99.19 | 100.00 | WP_011681286 |
| EGFLEGIP_1 | 1745526 | 1746257 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.77 | 100.00 | WP_011226048 |
| EGFLEGIP_1 | 1746968 | 1747703 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.37 | 99.33 | WP_011681174 |
| EGFLEGIP_1 | 1745526 | 1746257 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681176 |
| EGFLEGIP_1 | 1424289 | 1426034 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681434 |
| EGFLEGIP_1 | 1744071 | 1745525 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 98.01 | 100.00 | WP_011226049 |
| EGFLEGIP_1 | 1746968 | 1747703 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.83 | 99.33 | WP_011226046 |
| EGFLEGIP_1 | 1413677 | 1414936 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 97.70 | 100.00 | WP_011681445 |
| EGFLEGIP_1 | 1744071 | 1745525 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 96.99 | 99.79 | WP_011681177 |
| EGFLEGIP_1 | 1746266 | 1746958 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.75 | 100.00 | WP_011681175 |
| EGFLEGIP_1 | 332898 | 334201 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.09 | 99.54 | WP_000022832 |
| EGFLEGIP_1 | 1130840 | 1131850 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| EGFLEGIP_1 | 1420561 | 1421367 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| EGFLEGIP_1 | 780943 | 782226 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| EGFLEGIP_1 | 1634047 | 1635093 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| EGFLEGIP_1 | 1414933 | 1415631 | STER_RS07095 | 2.91e-152 | Capsule | Immune modulation | 81.15 | 70.35 | WP_011681444 |
| EGFLEGIP_1 | 1749632 | 1749868 | STR_RS05235* | 6.58e-119 | Capsule | Immune modulation | 100.00 | 100.00 | - |
| EGFLEGIP_1 | 1415985 | 1416451 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 94.02 | 65.13 | WP_011681442 |
| EGFLEGIP_1 | 1421367 | 1422104 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 85.09 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EGFLEGIP_1 | 1594813 | 1593830 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| EGFLEGIP_1 | 223712 | 222639 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| EGFLEGIP_1 | 416437 | 415469 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| EGFLEGIP_1 | 1251372 | 1249069 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| EGFLEGIP_1 | 203188 | 200942 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| EGFLEGIP_1 | 1512327 | 1510846 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 91.90 | 100.00 | ABJ54480 |
| EGFLEGIP_1 | 867969 | 866977 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| EGFLEGIP_1 | 904081 | 903110 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| EGFLEGIP_1 | 1365202 | 1366353 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| EGFLEGIP_1 | 1399675 | 1401657 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| EGFLEGIP_1 | 1611007 | 1612737 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.87 | 100.00 | AAK34199 |
| EGFLEGIP_1 | 942284 | 943762 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| EGFLEGIP_1 | 334201 | 332900 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| EGFLEGIP_1 | 957021 | 958913 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| EGFLEGIP_1 | 198017 | 199726 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| EGFLEGIP_1 | 1090158 | 1089148 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| EGFLEGIP_1 | 50592 | 51953 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| EGFLEGIP_1 | 1039827 | 1041719 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| EGFLEGIP_1 | 348631 | 347741 | bglB | 2.81e-178 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| EGFLEGIP_1 | 138617 | 139552 | SP_0676 | 7.12e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| EGFLEGIP_1 | 200750 | 199893 | metF | 8.34e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| EGFLEGIP_1 | 1707371 | 1708075 | covR | 3.38e-130 | responder protein | 84.68 | 100.00 | AAK71319 |
| EGFLEGIP_1 | 1541629 | 1542300 | rr01 | 2.84e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| EGFLEGIP_1 | 1707371 | 1708075 | walR | 2.42e-120 | DNA-binding response regulator | 80.85 | 100.00 | ANC99504 |
| EGFLEGIP_1 | 629547 | 628861 | CovR | 9.70e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| EGFLEGIP_1 | 194064 | 193414 | CiaR | 1.34e-116 | two-component response regulator | 86.17 | 96.88 | AAK74935 |
| EGFLEGIP_1 | 194064 | 193414 | ciaR | 6.87e-114 | two component system response regulator | 83.87 | 96.02 | AIK75708 |
| EGFLEGIP_1 | 866680 | 866285 | SpxA2 | 3.57e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| EGFLEGIP_1 | 39234 | 38833 | SpxA1 | 3.63e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| EGFLEGIP_1 | 780785 | 780285 | RopE (M5005_Spy_1611) | 9.53e-75 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| EGFLEGIP_1 | 1251372 | 1249075 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| EGFLEGIP_1 | 1054288 | 1055307 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |