Genome ID:GCA_001546215.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 10 | 10.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GECJGNHB_2 | 15905 | 17083 | tufA | 0.0 | elongation factor Tu | 85.24 | 99.49 | AHM69299 |
| GECJGNHB_16 | 28470 | 26965 | atpA | 0.0 | ATP synthase subunit alpha | 80.08 | 100.00 | ABD31377 |
| GECJGNHB_88 | 4512 | 5381 | pdxS | 1.07e-152 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| GECJGNHB_14 | 33877 | 34653 | CodY | 7.27e-129 | nutrient-responsive regulator | 81.85 | 100.00 | ACJ80679 |
| GECJGNHB_14 | 33877 | 34653 | codY | 3.50e-125 | global regulator and isoleucine sensor | 80.69 | 100.00 | ASW39076 |
| GECJGNHB_42 | 124444 | 123875 | ClpP | 5.34e-104 | part of proteolytic complex | 83.68 | 97.44 | BAB94595 |
| GECJGNHB_34 | 7820 | 7134 | WalR | 5.71e-104 | transcriptional regulatory protein | 80.79 | 97.44 | EPH95667 |
| GECJGNHB_122 | 7524 | 7132 | spxA1 | 1.24e-73 | redox-responsive transcription factor | 88.55 | 100.00 | AAF21893 |
| GECJGNHB_122 | 7524 | 7132 | spx | 2.69e-68 | essential gene which is a thiol/oxidative stress sensor | 80.92 | 100.00 | BAB57159 |
| GECJGNHB_10 | 17592 | 17834 | SpoVG | 7.92e-40 | RNA-binding protein | 82.72 | 79.41 | AAT02994 |
| GECJGNHB_12 | 15586 | 15389 | CspA | 3.82e-30 | cold shock protein | 83.33 | 100.00 | CAA62903 |
| GECJGNHB_155 | 64783 | 64977 | CspD | 3.24e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| GECJGNHB_155 | 64783 | 64980 | CspB | 2.18e-28 | cold shock protein | 80.30 | 100.00 | CAD00094 |