Genome ID:GCA_001565875.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1110415.39

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
NDOHBMKK_125120602512914aadKARO:3002627aadK98.59100.00AL009126.1
NDOHBMKK_124949632496165bltARO:3003006blt98.00100.00L32599.1
NDOHBMKK_113901741390491ykkDARO:3003064ykkD98.10100.00AL009126.1
NDOHBMKK_113898361390174ykkCARO:3003063ykkC98.21100.00AL009126.1
NDOHBMKK_1896735899305Bacillus subtilis mprFARO:3003324Bsub_mprF99.53100.00AL009126.3
NDOHBMKK_1602059603705vmlRARO:3004476vmlR98.36100.18NC_000964.3
NDOHBMKK_1332936333529tmrBARO:3003059tmrB99.49100.00AL009126.3
NDOHBMKK_1283885285318lmrBARO:3002813lmrB99.79100.00JYFL01000006.1
NDOHBMKK_1271070271990mphKARO:3004541mphK98.68100.00CP010314.1
NDOHBMKK_35680057450Streptococcus suis chloramphenicol acetyltransferaseARO:3004455Ssui_ACT_CHL94.91100.00AB080798.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
NDOHBMKK_35680057450cat(pC194)Chloramphenicol100.00100.00NC_002013
NDOHBMKK_125120602512914aadKStreptomycin98.83100.00M26879
NDOHBMKK_1271070271990mph(K)Spiramycin, Telithromycin98.05100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
NDOHBMKK_35680057447catAtype A-9 chloramphenicol O-acetyltransferaseEXACTX100.00100.00WP_001010387.1
NDOHBMKK_1271070271978mphKmacrolide 2'-phosphotransferase MphKBLASTX98.6899.02WP_003246254.1
NDOHBMKK_125120632512914aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
NDOHBMKK_1602062603705vmlRABC-F type ribosomal protection protein VmlRBLASTX98.36100.00WP_003234144.1
NDOHBMKK_140908264091344satAstreptothricin N-acetyltransferase SatABLASTX90.75100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
NDOHBMKK_135827243583905capB0.0CapsuleImmune modulation99.66100.00NP_391471
NDOHBMKK_130683793069164dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
NDOHBMKK_135810993582241capA0.0CapsuleImmune modulation99.30100.00NP_391469
NDOHBMKK_130573873064523dhbF0.0BacillibactinNutritional/Metabolic factor99.30100.00NP_391076
NDOHBMKK_119690931970856dep/capD0.0CapsuleImmune modulation99.04100.00NP_389723
NDOHBMKK_130645433065481dhbB0.0BacillibactinNutritional/Metabolic factor99.04100.00NP_391077
NDOHBMKK_130671573068353dhbC0.0BacillibactinNutritional/Metabolic factor99.00100.00NP_391079
NDOHBMKK_120999992100640hlyIII0.0Hemolysin IIIExotoxin98.91100.00NP_390062
NDOHBMKK_135822603582709capC0.0CapsuleImmune modulation98.89100.00NP_391470
NDOHBMKK_130655093067128dhbE0.0BacillibactinNutritional/Metabolic factor96.73100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
NDOHBMKK_1132826133962tufA0.0elongation factor Tu84.9695.69AHM69299
NDOHBMKK_11900919878pdxS5.36e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
NDOHBMKK_117005831701359CodY3.34e-124nutrient-responsive regulator81.08100.00ACJ80679
NDOHBMKK_134253483425917ClpP2.48e-98part of proteolytic complex81.0597.44BAB94595