Genome ID:GCA_001618905.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HHMOJFEP_1 | 2064053 | 2064550 | dfrG | ARO:3002868 | dfrG | 100.00 | 100.00 | AB205645.1 |
| HHMOJFEP_1 | 2029433 | 2030809 | tet(L) | ARO:3000179 | tet(L) | 98.47 | 100.00 | M11036.1 |
| HHMOJFEP_1 | 1223270 | 1225189 | tet(W) | ARO:3000194 | tet(W) | 96.87 | 100.00 | AJ222769.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HHMOJFEP_1 | 2064053 | 2064550 | dfrG | Trimethoprim | 100.00 | 100.00 | AB205645 |
| HHMOJFEP_1 | 2029433 | 2030809 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.64 | 100.00 | AY081910 |
| HHMOJFEP_1 | 1223270 | 1225189 | tet(W) | Doxycycline, Tetracycline, Minocycline | 99.01 | 100.00 | FN396364 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HHMOJFEP_1 | 2064056 | 2064550 | dfrG | trimethoprim-resistant dihydrofolate reductase DfrG | EXACTX | 100.00 | 100.00 | WP_000868795.1 |
| HHMOJFEP_1 | 1223273 | 1225189 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | BLASTX | 99.69 | 100.00 | WP_000691721.1 |
| HHMOJFEP_1 | 2029433 | 2030806 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.91 | 100.00 | WP_002294500.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||