Genome ID:GCA_001619555.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210918.03

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
IKHLGJIB_36497793498995bltARO:3003006blt99.75100.00L32599.1
IKHLGJIB_32346334347254mphKARO:3004541mphK97.39100.00CP010314.1
IKHLGJIB_32333002334441lmrBARO:3002813lmrB98.95100.42JYFL01000006.1
IKHLGJIB_32283485284078tmrBARO:3003059tmrB98.98100.00AL009126.3
IKHLGJIB_36273061274230bmrARO:3003007bmr99.23100.00M33768.1
IKHLGJIB_25268188270758Bacillus subtilis mprFARO:3003324Bsub_mprF99.53100.00AL009126.3
IKHLGJIB_27110931111248ykkDARO:3003064ykkD99.05100.00AL009126.1
IKHLGJIB_27110593110931ykkCARO:3003063ykkC100.00100.00AL009126.1
IKHLGJIB_249458295784bltARO:3003006blt99.75100.00L32599.1
IKHLGJIB_323751339159vmlRARO:3004476vmlR98.54100.18NC_000964.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
IKHLGJIB_157505076424tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline98.9899.85D12567
IKHLGJIB_32346334347254mph(K)Spiramycin, Telithromycin97.94100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
IKHLGJIB_323751339156vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
IKHLGJIB_32346337347254mphKmacrolide 2'-phosphotransferase MphKBLASTX97.39100.00WP_003246254.1
IKHLGJIB_157254973067satAstreptothricin N-acetyltransferase SatABLASTX90.75100.00WP_003242546.1
IKHLGJIB_157505375946tet(L)tetracycline efflux MFS transporter Tet(L)PARTIALX98.6665.07WP_063856081.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
IKHLGJIB_28224332225270dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
IKHLGJIB_1114423115604capB0.0CapsuleImmune modulation99.66100.00NP_391471
IKHLGJIB_367000470644hlyIII0.0Hemolysin IIIExotoxin99.5399.84NP_390062
IKHLGJIB_28220660221445dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
IKHLGJIB_28225290232426dhbF0.0BacillibactinNutritional/Metabolic factor99.43100.00NP_391076
IKHLGJIB_17142424144187dep/capD0.0CapsuleImmune modulation98.98100.00NP_389723
IKHLGJIB_1116087117229capA0.0CapsuleImmune modulation98.86100.00NP_391469
IKHLGJIB_28221471222667dhbC0.0BacillibactinNutritional/Metabolic factor98.83100.00NP_391079
IKHLGJIB_1115619116068capC0.0CapsuleImmune modulation98.67100.00NP_391470
IKHLGJIB_28222685224304dhbE0.0BacillibactinNutritional/Metabolic factor98.21100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
IKHLGJIB_62813627000tufA0.0elongation factor Tu85.7595.69AHM69299
IKHLGJIB_291138510516pdxS1.15e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
IKHLGJIB_12113141112365CodY1.52e-125nutrient-responsive regulator81.08100.00ACJ80679
IKHLGJIB_266992370492ClpP1.34e-99part of proteolytic complex81.0597.44BAB94595
IKHLGJIB_34292210292602spxA12.15e-70redox-responsive transcription factor83.97100.00AAF21893
IKHLGJIB_34292210292602spx1.28e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
IKHLGJIB_73487934637SpoVG7.58e-39RNA-binding protein81.4879.41AAT02994
IKHLGJIB_328513584938CspA1.76e-31cold shock protein90.91100.00CAA62903
IKHLGJIB_368261082804CspD3.22e-28cold shock protein81.5498.48CAC99957
IKHLGJIB_343338933195CspB3.10e-27cold shock protein83.0898.48CAD00094