Genome ID:GCA_001641145.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310416.88

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
AAAJLPDC_140788524079772mphKARO:3004541mphK100.00100.00CP010314.1
AAAJLPDC_140655244066957lmrBARO:3002813lmrB100.00100.00JYFL01000006.1
AAAJLPDC_140158634016456tmrBARO:3003059tmrB100.00100.00AL009126.3
AAAJLPDC_137492683750911vmlRARO:3004476vmlR100.00100.00NC_000964.3
AAAJLPDC_134344143436984Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
AAAJLPDC_129768182977156ykkCARO:3003063ykkC100.00100.00AL009126.1
AAAJLPDC_129765012976818ykkDARO:3003064ykkD100.00100.00AL009126.1
AAAJLPDC_118123121813481bmrARO:3003007bmr99.74100.00M33768.1
AAAJLPDC_115899781591180bltARO:3003006blt100.00100.00L32599.1
AAAJLPDC_115716231572477aadKARO:3002627aadK100.00100.00AL009126.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
AAAJLPDC_115716231572477aadKStreptomycin100.00100.00M26879
AAAJLPDC_140788524079772mph(K)Spiramycin, Telithromycin100.00100.00NC_000964
AAAJLPDC_1119481120857tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline100.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
AAAJLPDC_115716231572474aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
AAAJLPDC_140788554079772mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
AAAJLPDC_1122857123375satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
AAAJLPDC_1119481120854tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
AAAJLPDC_137492683750908vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
AAAJLPDC_122558582258452rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
AAAJLPDC_1609167610309capA0.0CapsuleImmune modulation100.00100.00NP_391469
AAAJLPDC_1607503608684capB0.0CapsuleImmune modulation100.00100.00NP_391471
AAAJLPDC_1608699609148capC0.0CapsuleImmune modulation100.00100.00NP_391470
AAAJLPDC_123033432305106dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
AAAJLPDC_110204721027608dhbF0.0BacillibactinNutritional/Metabolic factor99.99100.00NP_391076
AAAJLPDC_110195141020452dhbB0.0BacillibactinNutritional/Metabolic factor99.89100.00NP_391077
AAAJLPDC_110158301016616dhbA0.0BacillibactinNutritional/Metabolic factor99.87100.00NP_391080
AAAJLPDC_120121302012770hlyIII0.0Hemolysin IIIExotoxin99.8499.84NP_390062
AAAJLPDC_110166421017838dhbC0.0BacillibactinNutritional/Metabolic factor99.67100.00NP_391079
AAAJLPDC_110178671019486dhbE0.0BacillibactinNutritional/Metabolic factor99.57100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
AAAJLPDC_22792226786tufA0.0elongation factor Tu84.9695.69AHM69299
AAAJLPDC_17115870289pdxS3.10e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
AAAJLPDC_126635682662792CodY3.39e-124nutrient-responsive regulator81.08100.00ACJ80679
AAAJLPDC_1761902761333ClpP2.51e-98part of proteolytic complex81.0597.44BAB94595