Genome ID:GCA_001661555.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210717.12

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
MDOCEIMM_1679265680434bmrARO:3003007bmr99.74100.00M33768.1
MDOCEIMM_1505955507157bltARO:3003006blt99.00100.00L32599.1
MDOCEIMM_1487723488577aadKARO:3002627aadK98.24100.00AL009126.1
MDOCEIMM_12430061430378ykkDARO:3003064ykkD99.05100.00AL009126.1
MDOCEIMM_12429723430061ykkCARO:3003063ykkC100.00100.00AL009126.1
MDOCEIMM_16276325278895Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
MDOCEIMM_17192544194190vmlRARO:3004476vmlR98.91100.18NC_000964.3
MDOCEIMM_18109910110830mphKARO:3004541mphK98.69100.00CP010314.1
MDOCEIMM_189658498017lmrBARO:3002813lmrB99.58100.00JYFL01000006.1
MDOCEIMM_184686747460tmrBARO:3003059tmrB98.48100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
MDOCEIMM_18109910110830mph(K)Spiramycin, Telithromycin99.35100.00NC_000964
MDOCEIMM_1487723488577aadKStreptomycin98.71100.00M26879

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
MDOCEIMM_17192547194190vmlRABC-F type ribosomal protection protein VmlRBLASTX98.91100.00WP_003234144.1
MDOCEIMM_18109913110830mphKmacrolide 2'-phosphotransferase MphKBLASTX98.69100.00WP_003246254.1
MDOCEIMM_1487723488574aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
MDOCEIMM_153966140179satAstreptothricin N-acetyltransferase SatABLASTX93.64100.00WP_003242546.1
MDOCEIMM_1971518974115rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.41100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
MDOCEIMM_14172218173399capB0.0CapsuleImmune modulation99.75100.00NP_391471
MDOCEIMM_1877095877736hlyIII0.0Hemolysin IIIExotoxin99.69100.00NP_390062
MDOCEIMM_14575380576165dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
MDOCEIMM_14576191577387dhbC0.0BacillibactinNutritional/Metabolic factor99.33100.00NP_391079
MDOCEIMM_110179951019758dep/capD0.0CapsuleImmune modulation98.98100.00NP_389723
MDOCEIMM_14173882175024capA0.0CapsuleImmune modulation98.95100.00NP_391469
MDOCEIMM_14173414173863capC0.0CapsuleImmune modulation98.89100.00NP_391470
MDOCEIMM_14579063580001dhbB0.0BacillibactinNutritional/Metabolic factor98.62100.00NP_391077
MDOCEIMM_14580021587157dhbF0.0BacillibactinNutritional/Metabolic factor98.53100.00NP_391076
MDOCEIMM_14577416579035dhbE0.0BacillibactinNutritional/Metabolic factor96.97100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
MDOCEIMM_193480535941tufA0.0elongation factor Tu84.9695.69AHM69299
MDOCEIMM_374758344pdxS1.46e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
MDOCEIMM_12741548742324CodY8.28e-125nutrient-responsive regulator81.08100.00ACJ80679
MDOCEIMM_14315398314829ClpP4.15e-99part of proteolytic complex81.0597.44BAB94595
MDOCEIMM_12274341274733spxA16.51e-70redox-responsive transcription factor83.97100.00AAF21893
MDOCEIMM_12274341274733spx3.88e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
MDOCEIMM_203623235990SpoVG8.13e-39RNA-binding protein81.4879.41AAT02994
MDOCEIMM_17146118146315CspA9.71e-32cold shock protein90.91100.00CAA62903